Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Struthio_20camelus_20australis_20[refseq_20GCF_5F000698965.1_202014- 06-06] 6,915 sequences; 1,225,041,896 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq154 149 5e-32 >seq154 Length=54287 Score = 149 bits (164), Expect = 5e-32 Identities = 135/169 (80%), Gaps = 1/169 (1%) Strand=Plus/Plus Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065 ||||||||||| |||||||| || || |||||| | ||||||||||| || || | | Sbjct 975 AGGAGGTTTGAGATGGACCGTGACCCGCTCAGTGCCCGCTACTGTGCTGAATGCAACAAG 1034 Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125 |||| ||||| ||||| || ||||| ||||| ||||| |||||| |||| || || ||| Sbjct 1035 TTGCACCCTGCAGAGGAGGGCGACTTCTGGGCTGAGTCCAGCATGCTGGGGCTGAAGATC 1094 Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAGAGTGGG 5174 ||||||||||| |||||||||| ||| | || || ||||| | ||||| Sbjct 1095 ACCTACTTTGCCATGATGGATGGGAAGATCTACGACATCAC-GGGTGGG 1142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40208071819960