Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Struthio_20camelus_20australis_20[refseq_20GCF_5F000698965.1_202014-
06-06] 6,915 sequences; 1,225,041,896 total letters
Query= NC_003678.1
Length=12602
Score E
Sequences producing significant alignments: (Bits) Value
seq154 149 5e-32
>seq154
Length=54287
Score = 149 bits (164), Expect = 5e-32
Identities = 135/169 (80%), Gaps = 1/169 (1%)
Strand=Plus/Plus
Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065
||||||||||| |||||||| || || |||||| | ||||||||||| || || | |
Sbjct 975 AGGAGGTTTGAGATGGACCGTGACCCGCTCAGTGCCCGCTACTGTGCTGAATGCAACAAG 1034
Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125
|||| ||||| ||||| || ||||| ||||| ||||| |||||| |||| || || |||
Sbjct 1035 TTGCACCCTGCAGAGGAGGGCGACTTCTGGGCTGAGTCCAGCATGCTGGGGCTGAAGATC 1094
Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAGAGTGGG 5174
||||||||||| |||||||||| ||| | || || ||||| | |||||
Sbjct 1095 ACCTACTTTGCCATGATGGATGGGAAGATCTACGACATCAC-GGGTGGG 1142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40208071819960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |