Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zonotrichia_20albicollis_20[refseq_20GCF_5F000385455.1_202013-04-30] 6,018 sequences; 1,052,600,561 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq108 82.4 4e-13 >seq108 Length=2131741 Score = 82.4 bits (90), Expect = 4e-13 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||| | | ||||| ||||||||||| Sbjct 626661 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAGCACGGACGCTCACGCTCCACCTCC 626602 Query 897 CCG 899 ||| Sbjct 626601 CCG 626599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2860622456964