Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq19 141 7e-30 >seq19 Length=5503877 Score = 141 bits (156), Expect = 7e-30 Identities = 129/163 (79%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065 ||||||||||| |||||||| || || || |||| | |||||||| || || | | | Sbjct 3095179 AGGAGGTTTGAGATGGACCGTGACCCACTGAATGCCCGCTACTGTGCCGAATGCAGCAAG 3095120 Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125 || || | ||||| ||||| ||||| |||||||| || |||||| | || || || ||| Sbjct 3095119 CTTCACGCCGCTGAAGAAGGCGACTTCTGGGCAGAATCCAGCATGCTTGGACTGAAGATC 3095060 Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 || |||||||| |||||||||||||||| ||||| ||||||| Sbjct 3095059 ACATACTTTGCCATGATGGATGGAAAGGTTTATGACATCACAG 3095017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40208279008168