Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apalone_20spinifera_20[genbank_20GCA_5F000385615.1_202013-05-03] 286,620 sequences; 1,931,078,847 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq284600 84.2 1e-13 seq285441 77.0 2e-11 >seq284600 Length=7302563 Score = 84.2 bits (92), Expect = 1e-13 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||| |||||||||||||||||||||| ||||||| | | | ||||| |||||||||||| Sbjct 4124946 CTGCACAGGCATAGTTCACCATCTTTCCGGTCCTAGCACTTACGCTCATGCTCCACCTCC 4124887 Query 897 CCGACG 902 | |||| Sbjct 4124886 CTGACG 4124881 >seq285441 Length=4619505 Score = 77.0 bits (84), Expect = 2e-11 Identities = 62/74 (84%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||| |||||||||||||||| |||||||| | | | | ||| ||||||| |||| Sbjct 797086 CTGCCCAGGAATAGTTCACCATCTTTTGGGTCCTAGCACGTACACTCATGCTCCATCTCC 797027 Query 897 CCGACGCGGTCGGG 910 |||| | || |||| Sbjct 797026 CCGATG-GGGCGGG 797014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2852344136760