Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chelonia_20mydas_20[refseq_20GCF_5F000344595.1_202013-03-18] 140,023 sequences; 2,208,410,377 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq77609 125 6e-25 >seq77609 Length=984869 Score = 125 bits (138), Expect = 6e-25 Identities = 126/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 5020 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5079 ||||||||| || |||||| | || || || || | ||||| || ||||| | Sbjct 300151 TAGGAGGTTCGAGATGGACAGAGATCCGCTCAGCGCTCGCTACTGCGCGGAGTGCGGCAA 300092 Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139 |||||| ||||| |||| || ||||| ||||| || || |||||| |||| || ||||| Sbjct 300091 GCTGCACCCTGCCAAGGAGGGAGACTTCTGGGCCGAATCAAGCATGCTGGGGCTGAAAAT 300032 Query 5140 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183 ||||||||| || ||||||||||| || || ||||| ||||||| Sbjct 300031 CACCTACTTCGCCCTGATGGATGGGAAAGTCTATGACATCACAG 299988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40055203139364