Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chelonia_20mydas_20[refseq_20GCF_5F000344595.1_202013-03-18] 140,023 sequences; 2,208,410,377 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq77609 129 5e-26 >seq77609 Length=984869 Score = 129 bits (142), Expect = 5e-26 Identities = 127/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 5005 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5064 ||||||||| || |||||| | || || || || | ||||| || ||||| | Sbjct 300151 TAGGAGGTTCGAGATGGACAGAGATCCGCTCAGCGCTCGCTACTGCGCGGAGTGCGGCAA 300092 Query 5065 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAAT 5124 |||||| ||||| |||| || ||||| ||||| || ||||||||| |||| || ||||| Sbjct 300091 GCTGCACCCTGCCAAGGAGGGAGACTTCTGGGCCGAATCAAGCATGCTGGGGCTGAAAAT 300032 Query 5125 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 ||||||||| || ||||||||||| || || ||||| ||||||| Sbjct 300031 CACCTACTTCGCCCTGATGGATGGGAAAGTCTATGACATCACAG 299988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40147856955352