Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03-
31] 78,595 sequences; 2,365,766,571 total letters
Query= NC_018464.1
Length=927
Score E
Sequences producing significant alignments: (Bits) Value
seq9502 105 4e-20
seq6186 105 4e-20
seq431 86.0 4e-14
seq180 78.8 5e-12
>seq9502
Length=473
Score = 105 bits (116), Expect = 4e-20
Identities = 81/91 (89%), Gaps = 4/91 (4%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||||| | | | ||||| ||||||||||||
Sbjct 457 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAGCACGTACGCTCATGCTCCACCTCC 398
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
|||||| || |||| || || ||||||||||
Sbjct 397 CCGACG-GGGCGGG-CG-AG-ACGGGCCGGT 371
>seq6186
Length=1201
Score = 105 bits (116), Expect = 4e-20
Identities = 81/91 (89%), Gaps = 4/91 (4%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||||| | | | ||||| ||||||||||||
Sbjct 372 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAGCACGTACGCTCATGCTCCACCTCC 313
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
|||||| || |||| || || ||||||||||
Sbjct 312 CCGACG-GGGCGGG-CG-AG-ACGGGCCGGT 286
>seq431
Length=435080
Score = 86.0 bits (94), Expect = 4e-14
Identities = 56/62 (90%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||| || | | ||||| ||||||||||||
Sbjct 146184 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCCAAAACGTACGCTCATGCTCCACCTCC 146243
Query 897 CC 898
||
Sbjct 146244 CC 146245
>seq180
Length=2213635
Score = 78.8 bits (86), Expect = 5e-12
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCT 894
||||||||||||||||| ||||||||||||||||| | ||| | ||| ||||||||||
Sbjct 1905536 CTGCCCAGGCATAGTTCGCCATCTTTCGGGTCCTAGCACATACACTCATGCTCCACCT 1905593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2858481290310
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |