Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gekko_20japonicus_20[refseq_20GCF_5F001447785.1_202015-11-25] 191,500 sequences; 2,490,274,461 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq2772 150 1e-32 >seq2772 Length=1470109 Score = 150 bits (166), Expect = 1e-32 Identities = 131/163 (80%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080 ||||||||||| |||||||| || || || |||| | |||||||| || |||| | | Sbjct 301972 AGGAGGTTTGAGATGGACCGTGATCCATTGAATGCCCGCTACTGTGCGGAATGTAGCAAG 302031 Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140 || ||| | || ||||| |||||||| ||||| || || |||||||| || || |||||| Sbjct 302032 CTTCATGCAGCGGAGGAGGGTGACTTCTGGGCTGAATCTAGCATGTTAGGGCTGAAAATC 302091 Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183 || || ||||| |||||||||||||||| ||||| ||||||| Sbjct 302092 ACATATTTTGCCATGATGGATGGAAAGGTTTATGACATCACAG 302134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40031969922000