Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malaclemys_20terrapin_20terrapin_20[genbank_20GCA_5F001728815.2_2020 16-09-20] 21,684 sequences; 2,439,754,582 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq6303 134 1e-27 >seq6303 Length=339531 Score = 134 bits (148), Expect = 1e-27 Identities = 128/164 (78%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 5020 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5079 ||||||||| || |||||||| || || || || | ||||| || ||||| | Sbjct 80188 TAGGAGGTTCGAGATGGACCGAGATCCGCTCAGCGCTCGCTACTGCGCGGAGTGCGGCAA 80129 Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139 |||||| ||||| ||||| || ||||| ||||| || ||||||||| |||| || ||||| Sbjct 80128 GCTGCACCCTGCCGAGGAGGGAGACTTCTGGGCCGAATCGAGCATGCTGGGGCTGAAAAT 80069 Query 5140 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183 ||||||||| || |||||||| || || || ||||| ||||||| Sbjct 80068 CACCTACTTCGCCCTGATGGACGGGAAAGTCTATGACATCACAG 80025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40108613316912