Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq4 131 1e-26 >seq4 Length=846980 Score = 131 bits (144), Expect = 1e-26 Identities = 129/164 (79%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 5006 AGGAGGTTTGAAATGGACCGGGAACC-TAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5064 ||||| ||||| ||||| || || || | || ||| |||||||||| || |||| || Sbjct 710229 AGGAGATTTGAGATGGATCGTGACCCATTGGAAGGCC-GATACTGTGCAGAATGTAGTAA 710287 Query 5065 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAAT 5124 | ||| | ||||||||||||||||| |||||||| || || ||| |||| | || || Sbjct 710288 ATTTCATGCAGCTGAGGAAGGTGACTTCTGGGCAGAATCCAGTATGCTGGGATTGAAGAT 710347 Query 5125 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 ||| |||||||| |||||||||| ||||| ||||| ||||||| Sbjct 710348 CACATACTTTGCCATGATGGATGGGAAGGTTTATGACATCACAG 710391 Score = 89.7 bits (98), Expect = 4e-14 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 5166 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATC 5225 |||| |||||||| |||||||| ||||||||||| |||||||| || |||| ||||||| Sbjct 711885 CAGAATGGGCTGGCTGCCAGCGAGTGGGAATCTCTCCAGATACGCATCGAGTTCCTTATC 711944 Query 5226 ACATCCCATTTGGTTCA 5242 ||||| | ||||| ||| Sbjct 711945 ACATCTCTTTTGGATCA 711961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40077116205976