Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq8838 100 2e-18 seq7962 89.7 3e-15 seq2794 84.2 1e-13 seq2655 75.2 6e-11 >seq8838 Length=18498 Score = 100 bits (110), Expect = 2e-18 Identities = 80/91 (88%), Gaps = 4/91 (4%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||| | | |||||| ||||||||||| Sbjct 9421 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAGCACGCGCGCTCACGCTCCACCTCC 9480 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 |||||| || |||| || || |||||||||| Sbjct 9481 CCGACG-GGGCGGG-CG-AG-ACGGGCCGGT 9507 >seq7962 Length=24135 Score = 89.7 bits (98), Expect = 3e-15 Identities = 66/75 (88%), Gaps = 4/75 (5%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTA--ACGCATGCGCTCGTGCTCCACCT 894 ||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||| Sbjct 8980 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAGCACGCAT--GCTCATGCTCCACCT 9037 Query 895 CCCCGACGCGGTCGG 909 ||| ||| ||| || Sbjct 9038 CCCTGACAGGGTGGG 9052 >seq2794 Length=193073 Score = 84.2 bits (92), Expect = 1e-13 Identities = 77/92 (84%), Gaps = 8/92 (9%) Strand=Plus/Minus Query 838 TGCCCAGGCATAGTTCACCATCTTTCGGGTCCTA--ACGCATGCGCTCGTGCTCCACCTC 895 |||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||| Sbjct 101108 TGCCCAGGCATAGTTCACCATCTTTCGGATCCTAGCACGCA--CGCTCACGCTTCACCTC 101051 Query 896 CCCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||||| | ||| || || || |||||||||| Sbjct 101050 CCCGATGGGGT--GGGCG-AG-ACGGGCCGGT 101023 >seq2655 Length=137793 Score = 75.2 bits (82), Expect = 6e-11 Identities = 58/69 (84%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||||||||| ||||||||||| ||||||| | | | |||| |||||||||||| Sbjct 17143 CTGCCCAGGCATAGATCACCATCTTTTAGGTCCTAGCACGCGTGCTCATGCTCCACCTCC 17202 Query 897 CCGACGCGG 905 | |||| || Sbjct 17203 CTGACGGGG 17211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2852055636702