Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelodiscus_20sinensis_20[refseq_20GCF_5F000230535.1_202012-07-24] 19,904 sequences; 2,202,483,752 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq6237 129 5e-26 >seq6237 Length=3891599 Score = 129 bits (142), Expect = 5e-26 Identities = 127/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 5005 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5064 |||||||||||| |||||||| || || | || | ||||| | ||||| | Sbjct 3000364 TAGGAGGTTTGAGATGGACCGAGAGCCCCTCAACGCTCGCTACTGCGGGGAGTGCGGCAA 3000305 Query 5065 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAAT 5124 |||||| ||||| ||||| || ||| | ||||| ||||| |||||| |||| || ||||| Sbjct 3000304 GCTGCACCCTGCCGAGGACGGGGACCTCTGGGCCGAGTCGAGCATGCTGGGGCTGAAAAT 3000245 Query 5125 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 ||||||||| || ||||||||||| || || ||||| ||||||| Sbjct 3000244 CACCTACTTCGCCCTGATGGATGGGAAAGTTTATGACATCACAG 3000201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40202195908096