Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelodiscus_20sinensis_20[refseq_20GCF_5F000230535.1_202012-07-24] 19,904 sequences; 2,202,483,752 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq473 100 2e-18 seq4493 75.2 6e-11 >seq473 Length=14938 Score = 100 bits (110), Expect = 2e-18 Identities = 79/91 (87%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||| | | | ||||| |||||||||||| Sbjct 11756 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAGCACGTACGCTCATGCTCCACCTCC 11697 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 |||| ||| | || || || |||||||||| Sbjct 11696 CCGA--CGGACCGGGCG-AG-ACGGGCCGGT 11670 >seq4493 Length=4276702 Score = 75.2 bits (82), Expect = 6e-11 Identities = 55/64 (86%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||| |||||||||||||||||||||||||| | ||| |||| || ||||||| | Sbjct 3724158 CTGCCCAGTCATAGTTCACCATCTTTCGGGTCCTAGCACATATGCTCATGTTCCACCTTC 3724217 Query 897 CCGA 900 | || Sbjct 3724218 CTGA 3724221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2860212792192