Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq4 136 3e-28 >seq4 Length=10978853 Score = 136 bits (150), Expect = 3e-28 Identities = 128/163 (79%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065 ||||||||||| ||||| || || || || ||| | ||||| || || |||| | | Sbjct 1684400 AGGAGGTTTGAGATGGATCGTGATCCACTGAATGCTCGCTACTGCGCAGAATGTAGCAAG 1684459 Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125 || ||| | ||||||||||||||||| ||||| || || || ||| | || || || ||| Sbjct 1684460 CTTCATGCAGCTGAGGAAGGTGACTTCTGGGCTGAATCCAGTATGCTAGGACTGAAGATC 1684519 Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 || |||||||| |||||||||||||||| ||||| ||||||| Sbjct 1684520 ACATACTTTGCCTTGATGGATGGAAAGGTTTATGACATCACAG 1684562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40204980282376