Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq805 136 3e-28 >seq805 Length=346143 Score = 136 bits (150), Expect = 3e-28 Identities = 130/164 (79%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 5021 AGGAGGTTTGAAATGGACCGGGAACC-TAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5079 ||||||||||| ||||| || || || | | | ||| | |||||||| || ||||| | Sbjct 59266 AGGAGGTTTGAGATGGATCGTGACCCCTTATA-TGCACGCTACTGTGCAGAATGTAACAA 59208 Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139 || ||| | ||||||||||||||||| ||||| || || |||||| | || | || || Sbjct 59207 ACTTCATGCAGCTGAGGAAGGTGACTTCTGGGCGGAATCCAGCATGCTAGGATTGAAGAT 59148 Query 5140 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183 ||| |||||||| |||||||||||||||| ||||| ||||||| Sbjct 59147 CACGTACTTTGCCATGATGGATGGAAAGGTTTATGACATCACAG 59104 Score = 87.8 bits (96), Expect = 1e-13 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 5180 ACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGT 5239 ||||| |||||||| |||||||| ||||||||||| |||||||| ||| |||| || | | Sbjct 55749 ACAGAATGGGCTGGCTGCCAGCGAGTGGGAATCTCTCCAGATACGCACCGAGTTCCATAT 55690 Query 5240 CACATCTCATTTGGTTCA 5257 ||||| || ||||| ||| Sbjct 55689 CACATTTCTTTTGGATCA 55672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40100747051484