Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latimeria_20chalumnae_20[refseq_20GCF_5F000225785.1_202011-09-12] 22,819 sequences; 2,860,591,921 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq2 159 3e-35 >seq2 Length=8563611 Score = 159 bits (176), Expect = 3e-35 Identities = 133/163 (82%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080 ||||| |||||||||||||| | || | || | |||||| |||| ||||||| | Sbjct 4184238 AGGAGATTTGAAATGGACCGCGCCCCCACCTACGCTCGTTACTGTTCTGAATGTAATAAG 4184297 Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140 |||| ||||| ||||||||||| || |||||||||||||||||| |||| || ||||| Sbjct 4184298 ATGCACCCTGCAGAGGAAGGTGATTTCTGGGCAGAGTCGAGCATGCTGGGACTGAAAATA 4184357 Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183 ||||||||||| |||||||||| ||||||||||| || |||| Sbjct 4184358 ACCTACTTTGCCATGATGGATGGCAAGGTGTATGACATAACAG 4184400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40108101055092