Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq462 95.1 7e-17 seq83912 89.7 3e-15 seq5019 84.2 1e-13 seq18965 77.0 2e-11 >seq462 Length=363519 Score = 95.1 bits (104), Expect = 7e-17 Identities = 61/67 (91%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||||||||||||| |||||||||||||| ||| ||| ||||| ||||||||||| Sbjct 332265 CTGCCCAGGCATAGTTCAGCATCTTTCGGGTCCCAACACATACGCTCTCGCTCCACCTCC 332206 Query 897 CCGACGC 903 ||||||| Sbjct 332205 CCGACGC 332199 >seq83912 Length=1019 Score = 89.7 bits (98), Expect = 3e-15 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||| ||| | | ||||| ||||||||||| Sbjct 517 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCCAACACGTACGCTCTCGCTCCACCTCC 458 Query 897 CCGACGC 903 || |||| Sbjct 457 CCTACGC 451 >seq5019 Length=5553 Score = 84.2 bits (92), Expect = 1e-13 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 838 TGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCC 897 |||||||||||||||||||||||||||| ||| ||| | | |||| |||||||||||| Sbjct 4582 TGCCCAGGCATAGTTCACCATCTTTCGGATCCCAACACGTACGCTGTCGCTCCACCTCCC 4523 Query 898 CGACGC 903 |||||| Sbjct 4522 CGACGC 4517 >seq18965 Length=2431 Score = 77.0 bits (84), Expect = 2e-11 Identities = 56/65 (86%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||| ||| ||| | | |||| ||||| ||||| Sbjct 1478 CTGCCCAGGCATAGTTCACCATCTTTCGGTTCCCAACACGTATGCTCTCGCTCCGCCTCC 1537 Query 897 CCGAC 901 ||||| Sbjct 1538 CCGAC 1542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2858259140250