Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq10253695 98.7 3e-17 seq10253694 98.7 3e-17 seq3449569 89.7 2e-14 seq9364500 80.6 9e-12 seq2141897 80.6 9e-12 >seq10253695 Length=124084 Score = 98.7 bits (108), Expect = 3e-17 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 1 CTTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCC 60 |||| |||| ||||||||| | ||||||| | | |||| |||| | || |||| Sbjct 9224 CTTTTCGATATTATGCAAATAATAGTACCAGATGTACATACAATATGTATGGGGATAGCT 9283 Query 61 GCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||||||||||| | ||||| |||| ||||||||||| |||||| ||||||| || Sbjct 9284 GCTTCAATGGGATCTTTCATCCTAATCGGGGGAGAAATTACTAAACGTATAGCATTACC 9342 >seq10253694 Length=124084 Score = 98.7 bits (108), Expect = 3e-17 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 1 CTTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCC 60 |||| |||| ||||||||| | ||||||| | | |||| |||| | || |||| Sbjct 9224 CTTTTCGATATTATGCAAATAATAGTACCAGATGTACATACAATATGTATGGGGATAGCT 9283 Query 61 GCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||||||||||| | ||||| |||| ||||||||||| |||||| ||||||| || Sbjct 9284 GCTTCAATGGGATCTTTCATCCTAATCGGGGGAGAAATTACTAAACGTATAGCATTACC 9342 >seq3449569 Length=459 Score = 89.7 bits (98), Expect = 2e-14 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 1 CTTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCC 60 |||| |||| ||||||||| | ||||||| | | |||| ||||| | || ||| Sbjct 313 CTTTTCGATATTATGCAAATAATAGTACCAGATGTGCATACAATATGCATGGGGATAGTT 372 Query 61 GCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||||||||| | | ||||| |||| ||||||||||| ||| || ||||||| || Sbjct 373 GCTTCAATGGGATATTTCATCCTAATCGGGGGAGAAATTACTAAATGTATAGCATTACC 431 >seq9364500 Length=212 Score = 80.6 bits (88), Expect = 9e-12 Identities = 89/119 (75%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 1 CTTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCC 60 |||| |||| ||||||||| | ||||| | | | |||| ||||| || ||| Sbjct 2 CTTTTCGATATTATGCAAATAATAGTACCATATGTACATACAATATGCAAGGGGATAGTT 61 Query 61 GCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||||||||||| | ||||| ||| |||||||||| |||||| ||||||| || Sbjct 62 GCTTCAATGGGATCTTTCATCCTAATCGAGAGAGAAATTACTAAACGTATAGCATTACC 120 >seq2141897 Length=863 Score = 80.6 bits (88), Expect = 9e-12 Identities = 89/119 (75%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 1 CTTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCC 60 |||| | ||| |||||| || | ||| ||| || | |||| ||||| | ||| || | Sbjct 779 CTTTTTAATATTATGCATATAATAGTACTAGATATACATACAATATGCATGGGAATATCT 720 Query 61 GCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||||||||||| | ||||| | | ||||||||| | ||| || ||||||| || Sbjct 719 GCTTCAATGGGATCTTTCATCCTAATTAGGGGAGAAATTGCTAAAAGTATAGCATTACC 661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16910350257600