Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Actinidia_20chinensis_20[genbank_20GCA_5F000467755.1_202013-09-16]
26,721 sequences; 604,217,145 total letters
Query= NC_033774.1
Length=8913
Score E
Sequences producing significant alignments: (Bits) Value
seq13458 104 1e-18
seq22976 98.7 6e-17
seq16433 98.7 6e-17
seq9755 98.7 6e-17
>seq13458
Length=41104
Score = 104 bits (114), Expect = 1e-18
Identities = 67/71 (94%), Gaps = 2/71 (3%)
Strand=Plus/Minus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13149 GCCCGTGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 13090
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 13089 GTATTAGCTCT 13079
Score = 95.1 bits (104), Expect = 7e-16
Identities = 65/71 (92%), Gaps = 2/71 (3%)
Strand=Plus/Minus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || || ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 7711 GCCCGAGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCAGGGTTTGTTGCAC 7652
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 7651 GTATTAGCTCT 7641
Score = 89.7 bits (98), Expect = 3e-14
Identities = 52/54 (96%), Gaps = 0/54 (0%)
Strand=Plus/Minus
Query 8852 TTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct 26828 TTGACCTTTTATCTAATAAATGCATCCCTTCAAGAAGTCAGGGTTTGTTGCACG 26775
>seq22976
Length=4458
Score = 98.7 bits (108), Expect = 6e-17
Identities = 66/71 (93%), Gaps = 2/71 (3%)
Strand=Plus/Minus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 277 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 218
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 217 GTATTAGCTCT 207
>seq16433
Length=43565
Score = 98.7 bits (108), Expect = 6e-17
Identities = 66/71 (93%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 40468 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 40527
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 40528 GTATTAGCTCT 40538
>seq9755
Length=31666
Score = 98.7 bits (108), Expect = 6e-17
Identities = 66/71 (93%), Gaps = 2/71 (3%)
Strand=Plus/Minus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 28358 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 28299
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 28298 GTATTAGCTCT 28288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 28397860716588
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |