Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14]
18,312 sequences; 192,487,774 total letters
Query= NC_001747.1
Length=5987
Score E
Sequences producing significant alignments: (Bits) Value
seq17927 118 4e-23
seq17884 86.0 2e-13
>seq17927
Length=56337
Score = 118 bits (130), Expect = 4e-23
Identities = 97/118 (82%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61
|||||||||| |||||| |||||| || || | | ||| ||||| | ||||| ||||
Sbjct 42096 TTTATGATACGATGCAATTTGTGCGCCCCGATGTACAGACAATATGCATGGGATTGGCCG 42037
Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119
||||||| | ||| ||||||| |||||||||| ||||||||||||| ||||||||||
Sbjct 42036 CTTCAATAGCATCCTTTATCCTAGTCGGAGGAGCAATTACCAAACGTATAGCATTCCC 41979
>seq17884
Length=61832
Score = 86.0 bits (94), Expect = 2e-13
Identities = 74/93 (80%), Gaps = 8/93 (9%)
Strand=Plus/Plus
Query 28 CCAGAAATCCGTACAGTATGCGTAGGATTAGCCGCTTCAATGGGATCTGTTATCCTGGTC 87
||||| ||| ||| ||||| | || |||||||| |||||||||||| ||||||
Sbjct 7455 CCAGATGTCCACACAATATGCATGGGGTTAGCCGCCTCAATGGGATCTTTTATCC----- 7509
Query 88 GGAGGAGAAATTACCAAACGTCTAGCATTCCCG 120
|||||||||||||||||| |||||||||||
Sbjct 7510 ---GGAGAAATTACCAAACGTTTAGCATTCCCG 7539
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19042585244160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |