Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amaranthus_20tuberculatus_20[genbank_20GCA_5F000180655.1_202009-06- 22] 15,440 sequences; 4,347,977 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq13344 150 7e-33 >seq13344 Length=38768 Score = 150 bits (166), Expect = 7e-33 Identities = 104/118 (88%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 |||||||||| |||||| |||||| |||||| | | |||| ||||| | |||||||| | Sbjct 5903 TTTATGATACCATGCAATTTGTGCGACCAGATGTACATACAATATGCATGGGATTAGCTG 5962 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||| Sbjct 5963 CTTCAATGGGATCTTTTATCCTGGTCGGAGGAGAAATTACTAAACGTTTAGCATTCCC 6020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19043183539200