Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30]
27,769 sequences; 726,710,453 total letters
Query= NC_033774.1
Length=8913
Score E
Sequences producing significant alignments: (Bits) Value
seq15457 95.1 7e-16
seq12717 95.1 7e-16
seq11941 95.1 7e-16
seq11379 95.1 7e-16
seq11368 95.1 7e-16
seq11102 95.1 7e-16
seq9410 95.1 7e-16
seq9325 95.1 7e-16
seq8654 95.1 7e-16
seq6191 95.1 7e-16
seq4550 95.1 7e-16
seq6700 91.5 8e-15
seq3464 89.7 3e-14
seq7518 87.8 1e-13
seq7801 86.0 4e-13
seq4777 84.2 1e-12
seq10914 82.4 4e-12
seq5425 82.4 4e-12
seq251 82.4 4e-12
seq5878 80.6 2e-11
>seq15457
Length=6274
Score = 95.1 bits (104), Expect = 7e-16
Identities = 65/71 (92%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || || ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2421 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGGTGCAC 2480
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 2481 GTATTAGCTCT 2491
>seq12717
Length=7233
Score = 95.1 bits (104), Expect = 7e-16
Identities = 65/71 (92%), Gaps = 2/71 (3%)
Strand=Plus/Minus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || || ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 5965 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGGTGCAC 5906
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 5905 GTATTAGCTCT 5895
>seq11941
Length=5696
Score = 95.1 bits (104), Expect = 7e-16
Identities = 65/71 (92%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || || ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 4700 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGGTGCAC 4759
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 4760 GTATTAGCTCT 4770
>seq11379
Length=4151
Score = 95.1 bits (104), Expect = 7e-16
Identities = 65/71 (92%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || || ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 404 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGGTGCAC 463
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 464 GTATTAGCTCT 474
>seq11368
Length=4605
Score = 95.1 bits (104), Expect = 7e-16
Identities = 65/71 (92%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || || ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 561 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGGTGCAC 620
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 621 GTATTAGCTCT 631
>seq11102
Length=10439
Score = 95.1 bits (104), Expect = 7e-16
Identities = 65/71 (92%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || || ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 5804 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGGTGCAC 5863
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 5864 GTATTAGCTCT 5874
>seq9410
Length=9158
Score = 95.1 bits (104), Expect = 7e-16
Identities = 65/71 (92%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || || ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 6216 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGGTGCAC 6275
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 6276 GTATTAGCTCT 6286
>seq9325
Length=11434
Score = 95.1 bits (104), Expect = 7e-16
Identities = 65/71 (92%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || || ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 8596 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGGTGCAC 8655
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 8656 GTATTAGCTCT 8666
>seq8654
Length=15305
Score = 95.1 bits (104), Expect = 7e-16
Identities = 65/71 (92%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || || ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 14310 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGGTGCAC 14369
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 14370 GTATTAGCTCT 14380
>seq6191
Length=24641
Score = 95.1 bits (104), Expect = 7e-16
Identities = 57/60 (95%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 6539 GCCCGCGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGGTGCAC 6598
Score = 86.0 bits (94), Expect = 4e-13
Identities = 63/71 (89%), Gaps = 2/71 (3%)
Strand=Plus/Minus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || || ||||||||||||||||||||||||||||||| |||| |||||||| |||||
Sbjct 10082 GCCCGCGTAGACCTTTTATCTAATAAATGCATCCCTTCCAAAAGTTGGGGTTTGGTGCAC 10023
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 10022 GTATTAGCTCT 10012
Score = 86.0 bits (94), Expect = 4e-13
Identities = 56/61 (92%), Gaps = 2/61 (3%)
Strand=Plus/Plus
Query 8855 ACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG--ATTGCTC 8912
|||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||
Sbjct 24293 ACCTTTTATCTAATAAATGCATCCCTTCTAGAAGTCGGGGTTTGGTGCACGTATTTGCTC 24352
Query 8913 T 8913
|
Sbjct 24353 T 24353
>seq4550
Length=42319
Score = 95.1 bits (104), Expect = 7e-16
Identities = 65/71 (92%), Gaps = 2/71 (3%)
Strand=Plus/Minus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || || ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 35008 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGGTGCAC 34949
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 34948 GTATTAGCTCT 34938
Score = 86.0 bits (94), Expect = 4e-13
Identities = 57/61 (93%), Gaps = 2/61 (3%)
Strand=Plus/Minus
Query 8855 ACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTC 8912
|||||||||||||||||||||||||||||||||||| ||||||| |||||| ||| ||||
Sbjct 39047 ACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCAGGGTTTGGTGCACGTATTAGCTC 38988
Query 8913 T 8913
|
Sbjct 38987 T 38987
>seq6700
Length=20577
Score = 91.5 bits (100), Expect = 8e-15
Identities = 59/62 (95%), Gaps = 2/62 (3%)
Strand=Plus/Plus
Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCT 8911
||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||
Sbjct 20075 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGGTGCACGTATTAGCT 20134
Query 8912 CT 8913
||
Sbjct 20135 CT 20136
>seq3464
Length=49131
Score = 89.7 bits (98), Expect = 3e-14
Identities = 62/68 (91%), Gaps = 2/68 (3%)
Strand=Plus/Plus
Query 8848 CGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-A 8906
|| |||||||||||||||||||||||||||||||||| || |||||||||| |||||| |
Sbjct 14763 CGCGTTGACCTTTTATCTAATAAATGCATCCCTTCCAAAATTCGGGGTTTGGTGCACGTA 14822
Query 8907 TT-GCTCT 8913
|| |||||
Sbjct 14823 TTAGCTCT 14830
Score = 89.7 bits (98), Expect = 3e-14
Identities = 61/66 (92%), Gaps = 2/66 (3%)
Strand=Plus/Plus
Query 8850 TGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT 8908
|||||| |||||||||||||||||||||||||||| ||||||||||||| |||||| |||
Sbjct 34367 TGTTGAGCTTTTATCTAATAAATGCATCCCTTCCAAAAGTCGGGGTTTGGTGCACGTATT 34426
Query 8909 -GCTCT 8913
|||||
Sbjct 34427 AGCTCT 34432
>seq7518
Length=12112
Score = 87.8 bits (96), Expect = 1e-13
Identities = 53/56 (95%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 8848 CGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCA 8903
|||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||
Sbjct 446 CGTGTTGACCTTTTCTCTAATAAATGCATCCCTTCTAGAAGTCGGGGTTTGCTGCA 501
>seq7801
Length=13873
Score = 86.0 bits (94), Expect = 4e-13
Identities = 52/55 (95%), Gaps = 0/55 (0%)
Strand=Plus/Plus
Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905
|| |||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct 11200 GTCGACCTTTTATCTAATAAATGCATCCCCTCCAGAAGTCGGGGTTTGGTGCACG 11254
>seq4777
Length=32976
Score = 84.2 bits (92), Expect = 1e-12
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCA 8903
|| || || |||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 3049 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTTGGGGTTTGGTGCA 3107
>seq10914
Length=5408
Score = 82.4 bits (90), Expect = 4e-12
Identities = 57/62 (92%), Gaps = 2/62 (3%)
Strand=Plus/Plus
Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCT 8911
||||||||||||||| |||||||||||||||||||| |||||||| |||||| ||| |||
Sbjct 5255 GACCTTTTATCTAATTAATGCATCCCTTCCAGAAGTTGGGGTTTGGTGCACGTATTAGCT 5314
Query 8912 CT 8913
||
Sbjct 5315 CT 5316
>seq5425
Length=30471
Score = 82.4 bits (90), Expect = 4e-12
Identities = 57/62 (92%), Gaps = 2/62 (3%)
Strand=Plus/Plus
Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCT 8911
||||||||||||||||| ||||||||||||||||||| ||||||| |||||| ||| |||
Sbjct 20654 GACCTTTTATCTAATAAGTGCATCCCTTCCAGAAGTCAGGGTTTGGTGCACGTATTAGCT 20713
Query 8912 CT 8913
||
Sbjct 20714 CT 20715
>seq251
Length=297614
Score = 82.4 bits (90), Expect = 4e-12
Identities = 57/62 (92%), Gaps = 2/62 (3%)
Strand=Plus/Plus
Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCT 8911
||||||||||||||||||| |||||||| |||||||||||||||| |||||| ||| |||
Sbjct 32298 GACCTTTTATCTAATAAATACATCCCTTTCAGAAGTCGGGGTTTGGTGCACGTATTAGCT 32357
Query 8912 CT 8913
||
Sbjct 32358 CT 32359
>seq5878
Length=24140
Score = 80.6 bits (88), Expect = 2e-11
Identities = 62/71 (87%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || || |||||||||||||||||||||||||||||||||| | |||||||| ||||
Sbjct 12389 GCCCGAGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAATTGGGGTTTGGTGCAT 12448
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 12449 GTATTAGCTCT 12459
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 28397525805132
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |