Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_001747.1
Length=5987
Score E
Sequences producing significant alignments: (Bits) Value
seq696 132 2e-27
seq2 132 2e-27
>seq696
Length=154923
Score = 132 bits (146), Expect = 2e-27
Identities = 100/118 (85%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61
||||||||||||||||| |||||| ||| || | | ||| ||||| | ||||| ||||
Sbjct 71125 TTTATGATACTATGCAATTTGTGCGACCCGATGTACAGACAATATGCATGGGATTGGCCG 71066
Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119
||||||| | ||| |||||||||||||||||| ||||||||||||| ||||||||||
Sbjct 71065 CTTCAATAGCATCCTTTATCCTGGTCGGAGGAGCAATTACCAAACGTATAGCATTCCC 71008
>seq2
Length=19320864
Score = 132 bits (146), Expect = 2e-27
Identities = 100/118 (85%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61
||||||||||||||||| |||||| ||| || | | ||| ||||| | ||||| ||||
Sbjct 8765295 TTTATGATACTATGCAATTTGTGCGACCCGATGTACAGACAATATGCATGGGATTGGCCG 8765354
Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119
||||||| | ||| |||||||||||||||||| ||||||||||||| ||||||||||
Sbjct 8765355 CTTCAATAGCATCCTTTATCCTGGTCGGAGGAGCAATTACCAAACGTATAGCATTCCC 8765412
Score = 132 bits (146), Expect = 2e-27
Identities = 100/118 (85%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61
||||||||||||||||| |||||| ||| || | | ||| ||||| | ||||| ||||
Sbjct 9172167 TTTATGATACTATGCAATTTGTGCGACCCGATGTACAGACAATATGCATGGGATTGGCCG 9172108
Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119
||||||| | ||| |||||||||||||||||| ||||||||||||| ||||||||||
Sbjct 9172107 CTTCAATAGCATCCTTTATCCTGGTCGGAGGAGCAATTACCAAACGTATAGCATTCCC 9172050
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19046255009280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |