Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20thaliana_20[refseq_20GCF_5F000001735.3_202011-05-11]
7 sequences; 119,667,750 total letters
Query= NC_033774.1
Length=8913
Score E
Sequences producing significant alignments: (Bits) Value
seq3 89.7 3e-14
seq2 89.7 3e-14
>seq3
Length=23459830
Score = 89.7 bits (98), Expect = 3e-14
Identities = 64/71 (90%), Gaps = 2/71 (3%)
Strand=Plus/Minus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || || ||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct 14197906 GCCCGCGTCGACCTTTTATCTAATAAATGCGTCCCTTCCATAAGTCGGGGTTTGTTGCAC 14197847
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 14197846 GTATTAGCTCT 14197836
>seq2
Length=19698289
Score = 89.7 bits (98), Expect = 3e-14
Identities = 64/71 (90%), Gaps = 2/71 (3%)
Strand=Plus/Minus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || || ||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct 3935 GCCCGCGTCGACCTTTTATCTAATAAATGCGTCCCTTCCATAAGTCGGGGTTTGTTGCAC 3876
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 3875 GTATTAGCTCT 3865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 28406397762996
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |