Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04] 28,775 sequences; 199,120,032 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq21382 132 2e-27 seq10507 93.3 2e-15 >seq21382 Length=20432 Score = 132 bits (146), Expect = 2e-27 Identities = 100/118 (85%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| ||| || | | ||| ||||| | ||||| |||| Sbjct 13415 TTTATGATACTATGCAATTTGTGCGACCCGATGTACAGACAATATGCATGGGATTGGCCG 13474 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||| | |||| ||||||| |||||||||| ||||||||||||| |||||||||| Sbjct 13475 CTTCAATAGCATCTTTTATCCTAGTCGGAGGAGCAATTACCAAACGTATAGCATTCCC 13532 >seq10507 Length=4239 Score = 93.3 bits (102), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 44 TATGCGTAGGATTAGCCGCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCA 103 ||||| | ||||| ||||||||||| | |||| ||||||| |||||||||| |||||||| Sbjct 3895 TATGCATGGGATTGGCCGCTTCAATAGCATCT-TTATCCTAGTCGGAGGAGCAATTACCA 3953 Query 104 AACGTCTAGCATTCCC 119 ||||| |||||||||| Sbjct 3954 AACGTATAGCATTCCC 3969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19040405592000