Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04] 28,775 sequences; 199,120,032 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq15206 98.7 6e-17 seq25990 80.6 2e-11 >seq15206 Length=4470 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 110 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 51 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 50 GTATTAGCTCT 40 >seq25990 Length=42251 Score = 80.6 bits (88), Expect = 2e-11 Identities = 62/71 (87%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct 41426 GCCCGCGTCGACCTTTTATCTAATAAATGCATTTTTTCTAGAAGTCGGGGTTTGTTGCAC 41485 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 41486 GTATTAGCTCT 41496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28397204315700