Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq8 127 8e-26 seq9 123 9e-25 seq2 96.9 1e-16 seq10 91.5 6e-15 seq1 78.8 4e-11 >seq8 Length=129606920 Score = 127 bits (140), Expect = 8e-26 Identities = 99/118 (84%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||| | ||| | | | ||||||||| | |||||||| | Sbjct 60357395 TTTATGATACTATGCAATTTGTACGACCCGCTGTACAGACAGTATGCATGGGATTAGCTG 60357336 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || | ||| |||||||||||||||||||||||||||||||| Sbjct 60357335 CTTCAATGGGATCTTTTCTTTTGGCAGGAGGAGAAATTACCAAACGTCTAGCATTCCC 60357278 >seq9 Length=147089397 Score = 123 bits (136), Expect = 9e-25 Identities = 98/118 (83%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 |||||||||||||| || |||| | ||| | | | ||||||||| | |||||||| | Sbjct 8791214 TTTATGATACTATGTAATTTGTACGACCCGCTGTACAGACAGTATGCATGGGATTAGCTG 8791273 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || | ||| |||||||||||||||||||||||||||||||| Sbjct 8791274 CTTCAATGGGATCTTTTCTTTTGGCAGGAGGAGAAATTACCAAACGTCTAGCATTCCC 8791331 >seq2 Length=108997779 Score = 96.9 bits (106), Expect = 1e-16 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 42 AGTATGCGTAGGATTAGCCGCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTAC 101 ||||||| | |||||||| ||||||||||||||| || | ||| |||||||||||||| Sbjct 22353691 AGTATGCATGGGATTAGCTGCTTCAATGGGATCTTTTCTTTTGGCAGGAGGAGAAATTAC 22353632 Query 102 CAAACGTCTAGCATTCCC 119 ||||||||||| |||||| Sbjct 22353631 CAAACGTCTAGTATTCCC 22353614 >seq10 Length=136175642 Score = 91.5 bits (100), Expect = 6e-15 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||| ||| | | | ||||||| | | |||||| | Sbjct 17458199 TTTATGATACTATGCAATTTGTATGACCCGCTGTATAGATAGTATGCATGGAATTAGCTG 17458258 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| || | || ||||| ||||||||||| ||||||||||||| Sbjct 17458259 CTTCAATGGGATCTTTTTTTTTGACAAGAGGAAAAATTACCAAATGTCTAGCATTCCC 17458316 >seq1 Length=137414913 Score = 78.8 bits (86), Expect = 4e-11 Identities = 90/121 (74%), Gaps = 5/121 (4%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||| | || | || | || |||| | | ||||||| Sbjct 2864660 TTTATGATACTATGCAATTTGTACGACTCGCTATACAAACGGTATACATGAGATTAGCTA 2864719 Query 62 CTTCAAT-----GGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATT 116 ||||||| ||||||| || | ||| || |||||||||||||||| | ||||||| Sbjct 2864720 CTTCAATAAAATGGGATCTTTTCTTTTGGAAGGTGGAGAAATTACCAAACATGTAGCATT 2864779 Query 117 C 117 | Sbjct 2864780 C 2864780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19046285840640