Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq396017 98.7 6e-17 seq139656 87.8 1e-13 seq196146 86.0 4e-13 seq358195 78.8 5e-11 >seq396017 Length=8487 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1921 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 1862 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 1861 GTATTAGCTCT 1851 >seq139656 Length=992 Score = 87.8 bits (96), Expect = 1e-13 Identities = 51/53 (96%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 8852 TTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct 896 TTGACCTTTTATCTAATAAATGCATCCCTTCTAGAAGTCAGGGTTTGTTGCAC 948 >seq196146 Length=1550 Score = 86.0 bits (94), Expect = 4e-13 Identities = 62/71 (87%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || ||||| |||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct 1371 GCCCGTGTCAACCTTTTATCTAATAAATGCATCCCTTCTAGAAGTTGGGGTTTGTTGCAT 1430 Query 8905 GATT--GCTCT 8913 | || ||||| Sbjct 1431 GTTTTAGCTCT 1441 >seq358195 Length=724 Score = 78.8 bits (86), Expect = 5e-11 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 8855 ACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905 |||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct 565 ACCTTTTATCTAATAAATGCATCCCTTCTAGAAGTCAAGGTTTGTTGCACG 515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28279841498700