Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq24949 114 5e-22 seq22875 86.0 2e-13 >seq24949 Length=429995 Score = 114 bits (126), Expect = 5e-22 Identities = 96/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| ||| || | | ||| ||||| | ||||| |||| Sbjct 17819 TTTATGATACTATGCAATTTGTGCGACCCGATGTACAGACAATATGCATGGGATTGGCCG 17878 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 | || ||||| ||| || |||||| || |||| || ||||||||||||||||||||| Sbjct 17879 CCTCCATGGGGTCTTTTCTCCTGGCCGCCGGAGCAAGTACCAAACGTCTAGCATTCCC 17936 Score = 114 bits (126), Expect = 5e-22 Identities = 96/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| ||| || | | ||| ||||| | ||||| |||| Sbjct 19557 TTTATGATACTATGCAATTTGTGCGACCCGATGTACAGACAATATGCATGGGATTGGCCG 19616 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 | || ||||| ||| || |||||| || |||| || ||||||||||||||||||||| Sbjct 19617 CCTCCATGGGGTCTTTTCTCCTGGCCGCCGGAGCAAGTACCAAACGTCTAGCATTCCC 19674 >seq22875 Length=274593 Score = 86.0 bits (94), Expect = 2e-13 Identities = 93/122 (76%), Gaps = 5/122 (4%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||||| ||| || | | | | ||||| | |||| ||| Sbjct 255963 TTTATGATACTATGCAATTTGTGCGACCCGATGTACAGATAATATGCATGAGATTGGCCA 255904 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAA----ACGTCTAGCATTC 117 | || ||||| ||| || |||||| || |||| || |||||| ||||||||||||| Sbjct 255903 CCTCCATGGGGTCT-TTCTCCTGGCCGCCGGAGCAAGTACCAAACGTACGTCTAGCATTC 255845 Query 118 CC 119 || Sbjct 255844 CC 255843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19041067008000