Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq25281 86.0 4e-13 seq21512 86.0 4e-13 seq19594 86.0 4e-13 seq20668 80.6 2e-11 >seq25281 Length=2126676 Score = 86.0 bits (94), Expect = 4e-13 Identities = 63/71 (89%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct 2115281 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCTAGAAGTTGGGGTTTGGTGCAC 2115340 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 2115341 GTATTAGCTCT 2115351 >seq21512 Length=11067 Score = 86.0 bits (94), Expect = 4e-13 Identities = 63/71 (89%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct 3816 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCTAGAAGTTGGGGTTTGGTGCAC 3757 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 3756 GTATTAGCTCT 3746 >seq19594 Length=977857 Score = 86.0 bits (94), Expect = 4e-13 Identities = 64/71 (90%), Gaps = 3/71 (4%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 |||||||| ||||||||||||||||||||||| ||||| |||||||||| |||| ||||| Sbjct 969404 GCTCGTGTCGACCTTTTATCTAATAAATGCAT-CCTTCTAGAAGTCGGGATTTGGTGCAC 969346 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 969345 GTATTAGCTCT 969335 >seq20668 Length=1057222 Score = 80.6 bits (88), Expect = 2e-11 Identities = 62/71 (87%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 ||||| || ||||||||||||| ||||||||||||||||| |||| ||| |||| ||||| Sbjct 11117 GCTCGCGTCGACCTTTTATCTACTAAATGCATCCCTTCCAAAAGTTGGGATTTGGTGCAC 11058 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 11057 GTATTAGCTCT 11047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28398218956800