Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20juncea_20var._20tumida_20[genbank_20GCA_5F001687265.1_202 016-09-23] 9,746 sequences; 954,861,368 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq783 104 1e-18 seq7768 98.7 6e-17 seq2505 98.7 6e-17 seq1871 98.7 6e-17 seq1529 98.7 6e-17 seq1322 98.7 6e-17 seq1169 98.7 6e-17 seq1158 98.7 6e-17 seq986 98.7 6e-17 seq881 98.7 6e-17 seq808 98.7 6e-17 seq759 98.7 6e-17 seq722 98.7 6e-17 seq420 98.7 6e-17 seq290 98.7 6e-17 seq203 98.7 6e-17 seq15 98.7 6e-17 seq9 98.7 6e-17 seq5 98.7 6e-17 seq6 96.9 2e-16 seq1225 95.1 7e-16 seq711 95.1 7e-16 seq109 95.1 7e-16 seq2700 93.3 2e-15 seq1526 93.3 2e-15 seq865 93.3 2e-15 seq551 93.3 2e-15 seq490 93.3 2e-15 seq28 93.3 2e-15 seq13 93.3 2e-15 seq1383 91.5 8e-15 seq706 91.5 8e-15 seq1456 89.7 3e-14 seq1022 89.7 3e-14 seq811 89.7 3e-14 seq4 89.7 3e-14 seq2 89.7 3e-14 seq1 89.7 3e-14 seq3320 87.8 1e-13 seq2248 87.8 1e-13 seq1762 87.8 1e-13 seq1476 87.8 1e-13 seq859 87.8 1e-13 seq548 87.8 1e-13 seq215 87.8 1e-13 seq1011 86.0 4e-13 seq2940 82.4 4e-12 seq1524 78.8 5e-11 >seq783 Length=44964 Score = 104 bits (114), Expect = 1e-18 Identities = 67/71 (94%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 39145 GCTCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 39086 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 39085 GTATTAGCTCT 39075 >seq7768 Length=1374 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 411 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 352 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 351 GTATTAGCTCT 341 >seq2505 Length=8261 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5095 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 5154 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 5155 GTATTAGCTCT 5165 >seq1871 Length=12995 Score = 98.7 bits (108), Expect = 6e-17 Identities = 60/64 (94%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9466 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 9525 Query 8905 GATT 8908 ||| Sbjct 9526 TATT 9529 >seq1529 Length=17149 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9587 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 9528 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 9527 GTATTAGCTCT 9517 >seq1322 Length=20621 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2301 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 2242 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 2241 GTATTAGCTCT 2231 >seq1169 Length=24383 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10195 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 10254 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 10255 GTATTAGCTCT 10265 Score = 93.3 bits (102), Expect = 2e-15 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 18898 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCAGGGTTTGTTGCAC 18957 Query 8905 G 8905 | Sbjct 18958 G 18958 >seq1158 Length=24745 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14320 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 14261 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 14260 GTATTAGCTCT 14250 >seq986 Length=31780 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14152 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 14093 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 14092 GTATTAGCTCT 14082 >seq881 Length=37911 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3434 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 3493 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 3494 GTATTAGCTCT 3504 Score = 87.8 bits (96), Expect = 1e-13 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct 24380 GCACGCGTGGACCTTTAATCTAATAAATGCATCCCTTCCAGAAGTTGGGGTTTGTTGCAC 24439 Query 8905 G 8905 | Sbjct 24440 G 24440 >seq808 Length=43315 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18901 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 18842 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 18841 GTATTAGCTCT 18831 Score = 96.9 bits (106), Expect = 2e-16 Identities = 53/53 (100%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 8853 TGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10256 TGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 10204 Score = 86.0 bits (94), Expect = 4e-13 Identities = 63/71 (89%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||| ||||||||| |||||||||| |||||||||| Sbjct 23129 GCCCGCGTGGACCTTTTATCTAATAAATACATCCCTTCAAGAAGTCGGGATTTGTTGCAC 23188 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 23189 GTATTAGCTCT 23199 >seq759 Length=46678 Score = 98.7 bits (108), Expect = 6e-17 Identities = 64/68 (94%), Gaps = 2/68 (3%) Strand=Plus/Plus Query 8848 CGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-A 8906 || || |||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 37174 CGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTA 37233 Query 8907 TT-GCTCT 8913 || ||||| Sbjct 37234 TTAGCTCT 37241 Score = 87.8 bits (96), Expect = 1e-13 Identities = 52/53 (98%), Gaps = 1/53 (2%) Strand=Plus/Plus Query 8854 GACCTTTTATCTA-ATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 17832 GACCTTTTATCTACATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 17884 >seq722 Length=49293 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9071 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 9012 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 9011 GTATTAGCTCT 9001 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17732 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 17673 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 17672 GTATTAGCTCT 17662 Score = 89.7 bits (98), Expect = 3e-14 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 75 GACCTTTTATCTACTAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 24 Score = 89.7 bits (98), Expect = 3e-14 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 32466 GACCTTTTATCTACTAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 32415 Score = 86.0 bits (94), Expect = 4e-13 Identities = 60/66 (91%), Gaps = 2/66 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct 23379 GCACGCGTGGACCTTTAATCTAATAAATGCATCCCTTCCAGAAGT-GGGGTTTGTTGCAC 23321 Query 8905 G-ATTG 8909 | |||| Sbjct 23320 GTATTG 23315 >seq420 Length=95832 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 27163 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 27104 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 27103 GTATTAGCTCT 27093 Score = 80.6 bits (88), Expect = 2e-11 Identities = 64/72 (89%), Gaps = 5/72 (7%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAA-TGCATCCCTTCCAGAAGTCGGGGTTTGTTGCA 8903 || || || |||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct 19046 GCCCGCGTCGACCTTTTATCTAATAAAATGCATCCCTTCCAGAAGT--GGGTTTGTTGCA 18989 Query 8904 CG-ATT-GCTCT 8913 || ||| ||||| Sbjct 18988 CGTATTAGCTCT 18977 >seq290 Length=129259 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 112213 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 112154 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 112153 GTATTAGCTCT 112143 Score = 82.4 bits (90), Expect = 4e-12 Identities = 49/50 (98%), Gaps = 1/50 (2%) Strand=Plus/Plus Query 8857 CTTTTATCTAA-TAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905 ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 757 CTTTTATCTAACTAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 806 >seq203 Length=166709 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 163464 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 163405 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 163404 GTATTAGCTCT 163394 >seq15 Length=50573455 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 40388968 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 40389027 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 40389028 GTATTAGCTCT 40389038 Score = 93.3 bits (102), Expect = 2e-15 Identities = 66/72 (92%), Gaps = 3/72 (4%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTC-GGGGTTTGTTGCA 8903 || || || ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 17781050 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCAGGGGTTTGTTGCA 17780991 Query 8904 CG-ATT-GCTCT 8913 || ||| ||||| Sbjct 17780990 CGTATTAGCTCT 17780979 Score = 93.3 bits (102), Expect = 2e-15 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 40413239 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCAGGGTTTGTTGCAC 40413298 Query 8905 G 8905 | Sbjct 40413299 G 40413299 Score = 93.3 bits (102), Expect = 2e-15 Identities = 63/68 (93%), Gaps = 2/68 (3%) Strand=Plus/Plus Query 8848 CGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-A 8906 ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| | Sbjct 40477148 CGTGTCGACCTTTTATCTAATAAATGCATCCCTTCTTGAAGTCGGGGTTTGTTGCACGTA 40477207 Query 8907 TT-GCTCT 8913 || ||||| Sbjct 40477208 TTAGCTCT 40477215 Score = 89.7 bits (98), Expect = 3e-14 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 40369175 GACCTTTTATCTACTAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 40369124 Score = 86.0 bits (94), Expect = 4e-13 Identities = 51/52 (98%), Gaps = 1/52 (2%) Strand=Plus/Plus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 5192056 GACCTTTTATCTA-TAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 5192106 Score = 80.6 bits (88), Expect = 2e-11 Identities = 51/53 (96%), Gaps = 2/53 (4%) Strand=Plus/Plus Query 8854 GACCTTTTATCTAA-TAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905 ||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct 17851684 GACCTTT-ATCTAACTAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 17851735 >seq9 Length=62778564 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 29194006 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 29194065 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 29194066 GTATTAGCTCT 29194076 >seq5 Length=38841276 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 20017863 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 20017804 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 20017803 GTATTAGCTCT 20017793 Score = 93.3 bits (102), Expect = 2e-15 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 20023138 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCAGGGTTTGTTGCAC 20023079 Query 8905 G 8905 | Sbjct 20023078 G 20023078 >seq6 Length=38054609 Score = 96.9 bits (106), Expect = 2e-16 Identities = 60/62 (97%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCT 8911 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct 9454828 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCT 9454769 Query 8912 CT 8913 || Sbjct 9454768 CT 9454767 Score = 87.8 bits (96), Expect = 1e-13 Identities = 58/62 (94%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCT 8911 |||||||||| |||||||||||| |||||||||||||||||||||||||||| ||| ||| Sbjct 31220409 GACCTTTTATATAATAAATGCATTCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCT 31220350 Query 8912 CT 8913 || Sbjct 31220349 CT 31220348 >seq1225 Length=22913 Score = 95.1 bits (104), Expect = 7e-16 Identities = 65/71 (92%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || ||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct 1481 GCCCGTGTCGACCTTTTATCCAATAAATGCATCCCTTCCAGAAGTCAGGGTTTGTTGCAC 1540 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 1541 GTATTAGCTCT 1551 >seq711 Length=50064 Score = 95.1 bits (104), Expect = 7e-16 Identities = 59/61 (97%), Gaps = 2/61 (3%) Strand=Plus/Plus Query 8855 ACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTC 8912 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct 41240 ACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTC 41299 Query 8913 T 8913 | Sbjct 41300 T 41300 Score = 89.7 bits (98), Expect = 3e-14 Identities = 64/71 (90%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || |||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct 10550 GCCCGCGTCGACCTTTTATGTAATAAATGCATCCCTTCGAGAAGTCGGGGTTTGTTGCAC 10609 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 10610 GTATTAGCTCT 10620 Score = 89.7 bits (98), Expect = 3e-14 Identities = 64/71 (90%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || |||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct 16319 GCCCGCGTCGACCTTTTATGTAATAAATGCATCCCTTCGAGAAGTCGGGGTTTGTTGCAC 16260 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 16259 GTATTAGCTCT 16249 >seq109 Length=279290 Score = 95.1 bits (104), Expect = 7e-16 Identities = 61/64 (95%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 8852 TTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-G 8909 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| | Sbjct 248959 TTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGATTTGTTGCACGTATTAG 249018 Query 8910 CTCT 8913 |||| Sbjct 249019 CTCT 249022 >seq2700 Length=7425 Score = 93.3 bits (102), Expect = 2e-15 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 2925 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCAGGGTTTGTTGCAC 2866 Query 8905 G 8905 | Sbjct 2865 G 2865 >seq1526 Length=17195 Score = 93.3 bits (102), Expect = 2e-15 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 10604 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCAGGGTTTGTTGCAC 10663 Query 8905 G 8905 | Sbjct 10664 G 10664 >seq865 Length=39301 Score = 93.3 bits (102), Expect = 2e-15 Identities = 63/68 (93%), Gaps = 2/68 (3%) Strand=Plus/Minus Query 8848 CGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-A 8906 ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| | Sbjct 28263 CGTGTCGACCTTTTATCTAATAAATGCATCCCTTCTTGAAGTCGGGGTTTGTTGCACGTA 28204 Query 8907 TT-GCTCT 8913 || ||||| Sbjct 28203 TTAGCTCT 28196 >seq551 Length=68471 Score = 93.3 bits (102), Expect = 2e-15 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCA 8903 || || || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6246 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCA 6188 >seq490 Length=77422 Score = 93.3 bits (102), Expect = 2e-15 Identities = 63/68 (93%), Gaps = 2/68 (3%) Strand=Plus/Minus Query 8848 CGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-A 8906 ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| | Sbjct 21023 CGTGTCGACCTTTTATCTAATAAATGCATCCCTTCTTGAAGTCGGGGTTTGTTGCACGTA 20964 Query 8907 TT-GCTCT 8913 || ||||| Sbjct 20963 TTAGCTCT 20956 >seq28 Length=1539140 Score = 93.3 bits (102), Expect = 2e-15 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1089422 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCAGGGTTTGTTGCAC 1089363 Query 8905 G 8905 | Sbjct 1089362 G 1089362 Score = 93.3 bits (102), Expect = 2e-15 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1095580 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCAGGGTTTGTTGCAC 1095521 Query 8905 G 8905 | Sbjct 1095520 G 1095520 >seq13 Length=83567108 Score = 93.3 bits (102), Expect = 2e-15 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 51818712 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCAGGGTTTGTTGCAC 51818653 Query 8905 G 8905 | Sbjct 51818652 G 51818652 >seq1383 Length=19491 Score = 91.5 bits (100), Expect = 8e-15 Identities = 58/62 (94%), Gaps = 1/62 (2%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTC-GGGGTTTGTTGCA 8903 || || || ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 9395 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCAGGGGTTTGTTGCA 9336 Query 8904 CG 8905 || Sbjct 9335 CG 9334 >seq706 Length=50583 Score = 91.5 bits (100), Expect = 8e-15 Identities = 56/60 (93%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 48865 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCAGGGTTTGTTGCAC 48806 >seq1456 Length=18379 Score = 89.7 bits (98), Expect = 3e-14 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 9161 GACCTTTTATCTACTAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 9110 Score = 87.8 bits (96), Expect = 1e-13 Identities = 53/55 (96%), Gaps = 1/55 (2%) Strand=Plus/Minus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905 || ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 18214 GTCGACCTTTTATCTA-TAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 18161 >seq1022 Length=30531 Score = 89.7 bits (98), Expect = 3e-14 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 24067 GACCTTTTATCTACTAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 24118 >seq811 Length=43247 Score = 89.7 bits (98), Expect = 3e-14 Identities = 57/61 (93%), Gaps = 1/61 (2%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 15239 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTC-GGGTTTGTTGCAC 15181 Query 8905 G 8905 | Sbjct 15180 G 15180 Score = 89.7 bits (98), Expect = 3e-14 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 22754 GACCTTTTATCTACTAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 22703 >seq4 Length=33175494 Score = 89.7 bits (98), Expect = 3e-14 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 30442441 GACCTTTTATCTACTAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 30442390 >seq2 Length=25468329 Score = 89.7 bits (98), Expect = 3e-14 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 21858938 GACCTTTTATCTACTAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 21858989 >seq1 Length=45320942 Score = 89.7 bits (98), Expect = 3e-14 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 25536861 GACCTTTTATCTACTAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 25536810 >seq3320 Length=5336 Score = 87.8 bits (96), Expect = 1e-13 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct 2864 GCACGCGTGGACCTTTAATCTAATAAATGCATCCCTTCCAGAAGTTGGGGTTTGTTGCAC 2923 Query 8905 G 8905 | Sbjct 2924 G 2924 >seq2248 Length=9753 Score = 87.8 bits (96), Expect = 1e-13 Identities = 58/62 (94%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCT 8911 |||||||||| |||||||||||| |||||||||||||||||||||||||||| ||| ||| Sbjct 2464 GACCTTTTATATAATAAATGCATTCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCT 2405 Query 8912 CT 8913 || Sbjct 2404 CT 2403 >seq1762 Length=14206 Score = 87.8 bits (96), Expect = 1e-13 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct 9697 GCACGCGTGGACCTTTAATCTAATAAATGCATCCCTTCCAGAAGTTGGGGTTTGTTGCAC 9756 Query 8905 G 8905 | Sbjct 9757 G 9757 >seq1476 Length=18086 Score = 87.8 bits (96), Expect = 1e-13 Identities = 58/62 (94%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCT 8911 |||||||||| |||||||||||| |||||||||||||||||||||||||||| ||| ||| Sbjct 6916 GACCTTTTATATAATAAATGCATTCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCT 6857 Query 8912 CT 8913 || Sbjct 6856 CT 6855 >seq859 Length=39735 Score = 87.8 bits (96), Expect = 1e-13 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct 11539 GCACGCGTGGACCTTTAATCTAATAAATGCATCCCTTCCAGAAGTTGGGGTTTGTTGCAC 11598 Query 8905 G 8905 | Sbjct 11599 G 11599 >seq548 Length=69222 Score = 87.8 bits (96), Expect = 1e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTC-GGGGTTTGTTGCA 8903 || || || |||||| |||||||||||||||||||||||||||||| ||||||||||||| Sbjct 26382 GCCCGCGTCGACCTTATATCTAATAAATGCATCCCTTCCAGAAGTCGGGGGTTTGTTGCA 26323 Query 8904 CG-ATT-GCTCT 8913 || ||| ||||| Sbjct 26322 CGTATTAGCTCT 26311 Score = 87.8 bits (96), Expect = 1e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTC-GGGGTTTGTTGCA 8903 || || || |||||| |||||||||||||||||||||||||||||| ||||||||||||| Sbjct 38991 GCCCGCGTCGACCTTATATCTAATAAATGCATCCCTTCCAGAAGTCGGGGGTTTGTTGCA 39050 Query 8904 CG-ATT-GCTCT 8913 || ||| ||||| Sbjct 39051 CGTATTAGCTCT 39062 >seq215 Length=158165 Score = 87.8 bits (96), Expect = 1e-13 Identities = 58/62 (94%), Gaps = 2/62 (3%) Strand=Plus/Plus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCT 8911 |||||||||| |||||||||||| |||||||||||||||||||||||||||| ||| ||| Sbjct 20956 GACCTTTTATATAATAAATGCATTCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCT 21015 Query 8912 CT 8913 || Sbjct 21016 CT 21017 >seq1011 Length=30989 Score = 86.0 bits (94), Expect = 4e-13 Identities = 63/71 (89%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||| ||||||||| |||||||||| |||||||||| Sbjct 18417 GCCCGCGTGGACCTTTTATCTAATAAATACATCCCTTCAAGAAGTCGGGATTTGTTGCAC 18476 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 18477 GTATTAGCTCT 18487 >seq2940 Length=6478 Score = 82.4 bits (90), Expect = 4e-12 Identities = 47/48 (98%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 8857 CTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 2237 CTTTTATCTAATAAATGCATCCCTTCCAGAAGTCAGGGTTTGTTGCAC 2190 >seq1524 Length=17279 Score = 78.8 bits (86), Expect = 5e-11 Identities = 50/52 (96%), Gaps = 2/52 (4%) Strand=Plus/Minus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905 ||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 9120 GACCTTTTATCTA-TAAATGCATCCCTTCCAGAAGTC-GGGTTTGTTGCACG 9071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28403285451288