Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06]
17,764 sequences; 369,781,828 total letters
Query= NC_004047.1
Length=9612
Score E
Sequences producing significant alignments: (Bits) Value
seq4616 159 2e-35
>seq4616
Length=1066
Score = 159 bits (176), Expect = 2e-35
Identities = 297/436 (68%), Gaps = 0/436 (0%)
Strand=Plus/Minus
Query 8775 TTGAGTACAAACCGCAGCAGACGGACTTGTACAACACAAGAGCTACCAAGGCACAATTTG 8834
|| ||||||| ||||| || | ||| | | ||||| | || || | |||||||||
Sbjct 998 TTCAGTACAATCCGCAACAAATTGACATTTCTAACACTCGTGCCACTCATTCACAATTTG 939
Query 8835 AAAGATGGTACGAAGCAGTCAAGACTGAATATGAGCTTAATGACCAGCAAATGGGAGTAG 8894
| | ||||| || | ||| | || ||| |||| |||||||| | ||||| |||
Sbjct 938 AGAAGTGGTATGAGGGAGTGAGGAATGATTATGGCCTTAATGATAATGAAATGCAAGTGA 879
Query 8895 TAATGAATGGCTTCATGGTGTGGTGCATCGATAATGGGACATCTCCCGATGTGAATGGAG 8954
| | ||||| || ||||| ||||| ||||| ||||| |||||||| || | ||| |
Sbjct 878 TGCTAAATGGTTTGATGGTTTGGTGTATCGAGAATGGTACATCTCCAGACATATCTGGTG 819
Query 8955 TGTGGGTGATGATGGATGGAGATGAGCAAATAGAATACCCATTGAAGCCAATGGTTGAGA 9014
| ||||| ||||||||||| || ||| | || || ||| | ||||| || |||||
Sbjct 818 TCTGGGTTATGATGGATGGGGAAACCCAAGTTGATTATCCAATCAAGCCTTTGATTGAGC 759
Query 9015 ATGCAAAGCCTACGCTGCGACAAGTTATGCATCATTTTTCAGATGCAGCGGAGGCTTATA 9074
|||| | || | | | ||| ||||| ||| ||| | || || || || || |
Sbjct 758 ATGCTACTCCGTCATTTAGGCAAATTATGGCTCACTTTAGTAACGCGGCAGAAGCATACA 699
Query 9075 TAGAGATGAGGAATTCTGAAGGGTTCTACATGCCTAGGTATGGACTTCTTCGGAATTTGA 9134
| | || ||| ||| || | | |||||||| |||||||| | | |||||||
Sbjct 698 TTGCGAAGAGAAATGCTACTGAGAGGTACATGCCGCGGTATGGAATCAAGAGAAATTTGA 639
Query 9135 GGGATAAAAGCTTGGCTCGCTATGCATTCGATTTCTATGAGGTTAACTCAAAAACCTCAG 9194
|| | ||| | ||| | || || ||||| ||||||||||| || || ||||| | |
Sbjct 638 CTGACATTAGCCTCGCTAGATACGCTTTCGACTTCTATGAGGTGAATTCGAAAACACCTG 579
Query 9195 ACAGAGCCAGAGAAGC 9210
| || || | |||||
Sbjct 578 ATAGGGCTCGCGAAGC 563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 30637076109696
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |