Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= NC_007433.1 Length=10429 Score E Sequences producing significant alignments: (Bits) Value seq4616 197 9e-47 >seq4616 Length=1066 Score = 197 bits (218), Expect = 9e-47 Identities = 322/460 (70%), Gaps = 8/460 (2%) Strand=Plus/Minus Query 9648 TACAAGCCCGACCAAGTTGACTTATACAACACGCGAGCGACACACGCACAATTCAAAACG 9707 ||||| || | ||| ||||| | | ||||| || || || || ||||||| | | | Sbjct 993 TACAATCCGCAACAAATTGACATTTCTAACACTCGTGCCACTCATTCACAATTTGAGAAG 934 Query 9708 TGGTACGAAGCAGTGAAACTCGAATACGAATTGACGGATGAACAAATGAAGATAGTTATG 9767 ||||| || | ||||| || || | | | ||| | ||||| | ||| ||| Sbjct 933 TGGTATGAGGGAGTGAGGAATGATTATGGCCTTAATGATAATGAAATGCA---AGTGATG 877 Query 9768 ---AATGGATTGATGGTGTGGTGCATCGAAAATGGAACATCACAAAATTTGACGGGGGTT 9824 ||||| |||||||| ||||| ||||| ||||| ||||| | | | | | || || Sbjct 876 CTAAATGGTTTGATGGTTTGGTGTATCGAGAATGGTACATCTCCAGACATATCTGGTGTC 817 Query 9825 TGGACAATGATGGATGGTGATAACCAAATGGAATATCCACTCAGTCCTATAATTGATAAT 9884 ||| ||||||||||| || | |||| | || |||||| ||| ||| | ||||| || Sbjct 816 TGGGTTATGATGGATGGGGAAACCCAAGTTGATTATCCAATCAAGCCTTTGATTGAGCAT 757 Query 9885 GCGAAACCCACATTCAGACAGATAATGGCACATTTCAGTGACGCAGCTGAAGCGTACATT 9944 || | || |||| || || || ||||| || || ||| |||| || ||||| |||||| Sbjct 756 GCTACTCCGTCATTTAGGCAAATTATGGCTCACTTTAGTAACGCGGCAGAAGCATACATT 697 Query 9945 GAATATAGAAATGCCACAGAAAAATACATGCCCCGGTATGGACTTCAGCGAAACTTAAGA 10004 | | |||||||| || || | |||||||| ||||||||| | || |||| || | Sbjct 696 GCGAAGAGAAATGCTACTGAGAGGTACATGCCGCGGTATGGAATCAAGAGAAATTTGACT 637 Query 10005 GAATACAGCTTAGCACGTTACGCATTCGACTTTTATGAGATGAACTCAAAGACGCC-GAT 10063 || ||| | || | ||||| |||||||| |||||| |||| || || || || ||| Sbjct 636 GACATTAGCCTCGCTAGATACGCTTTCGACTTCTATGAGGTGAATTCGAAAACACCTGAT 577 Query 10064 CCGCGCGAAGGAAGCTCATATGCAGATGAAAGCGGCAGCG 10103 | || |||||||| ||||||||||| || |||||| Sbjct 576 -AGGGCTCGCGAAGCTCACATGCAGATGAAGGCTGCAGCG 538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 33250953634928