Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= NC_018872.2 Length=9512 Score E Sequences producing significant alignments: (Bits) Value seq4616 168 4e-38 >seq4616 Length=1066 Score = 168 bits (186), Expect = 4e-38 Identities = 309/453 (68%), Gaps = 0/453 (0%) Strand=Plus/Minus Query 8817 AATGGATTAATGGTGTGGTGCATTGAAAATGGCACCTCACCAAACATAAATGGCTCATGG 8876 ||||| || ||||| ||||| || || ||||| || || ||| ||||| ||| ||| Sbjct 873 AATGGTTTGATGGTTTGGTGTATCGAGAATGGTACATCTCCAGACATATCTGGTGTCTGG 814 Query 8877 GTTATGATGGATGGGGATGAGCAGATTGAATACCCCTTGAAACCGATTGTTGAAAATGCA 8936 ||||||||||||||||| || |||| || || | || || | |||| |||| Sbjct 813 GTTATGATGGATGGGGAAACCCAAGTTGATTATCCAATCAAGCCTTTGATTGAGCATGCT 754 Query 8937 AAACCAACACTGCGACAGATTATGATGCATTTCAGCGATCTTGCGGAAGCGTATATCGAG 8996 | || || | | || |||||| || || || | || ||||| || || | | Sbjct 753 ACTCCGTCATTTAGGCAAATTATGGCTCACTTTAGTAACGCGGCAGAAGCATACATTGCG 694 Query 8997 AAGAGGAATCTGAAAGAGAAGTATATGCCTCGATACGGCTTGATCCGCAATTTGACAGAC 9056 ||||| ||| | |||| ||| ||||| || || || | | | |||||||| ||| Sbjct 693 AAGAGAAATGCTACTGAGAGGTACATGCCGCGGTATGGAATCAAGAGAAATTTGACTGAC 634 Query 9057 ATGACTCTCGCACGCTATGCCTTTGATTTCTACGAAGTGACTTCCAGAACACCTGCACGT 9116 || | ||||| | || || || || ||||| || |||| ||| | |||||||| | Sbjct 633 ATTAGCCTCGCTAGATACGCTTTCGACTTCTATGAGGTGAATTCGAAAACACCTGATAGG 574 Query 9117 GCAAGAGAAGCACATATACAGATGAAGGCAGCCGCTTTACGAAATGCTAGCACCAAAATG 9176 || | ||||| || || ||||||||||| || || | ||||| | || ||||||| Sbjct 573 GCTCGCGAAGCTCACATGCAGATGAAGGCTGCAGCGCTGCGAAACACCAGTCGCAAAATG 514 Query 9177 TTTGGTCTAGATGGCAACGTGGGGACGAAAGAGGAGAACACTGAGCGACACACAGCAGAG 9236 |||||| | || |||| || | | || || || ||||| ||| ||||||||| || Sbjct 513 TTTGGTATGGACGGCAGTGTTAGTAACAAGGAAGAAAACACGGAGAGACACACAGTGGAA 454 Query 9237 GACGTCTCCCGTGAGATGCATAATCTCATGGGT 9269 || ||| | || ||||| |||| ||||| Sbjct 453 GATGTCAATAGAGACATGCACTCTCTCCTGGGT 421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30317140060096