Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= NC_019415.1 Length=9842 Score E Sequences producing significant alignments: (Bits) Value seq4616 149 4e-32 >seq4616 Length=1066 Score = 149 bits (164), Expect = 4e-32 Identities = 308/453 (68%), Gaps = 9/453 (2%) Strand=Plus/Minus Query 9047 GTGATG---AATGGTTTCATGGTTTGGTGCATTGACAATGGCACATCACCAGACGTGAAC 9103 |||||| |||||||| ||||||||||| || || ||||| ||||| |||||| | Sbjct 882 GTGATGCTAAATGGTTTGATGGTTTGGTGTATCGAGAATGGTACATCTCCAGACATATCT 823 Query 9104 GGAGTGTGGGTCATGATGGATGGGGATGAGCAAGTTGAATATCCTTTGAAACCTATGGTT 9163 || || ||||| |||||||||||||| |||||||| ||||| | || ||| || || Sbjct 822 GGTGTCTGGGTTATGATGGATGGGGAAACCCAAGTTGATTATCCAATCAAGCCTTTGATT 763 Query 9164 GAGAATGCAAAACCCACACTGAGACAGATAATGCACCATTTTTCTGATGCTGCTGAAGCA 9223 ||| |||| | || || | || || || ||| || ||| | | || || |||||| Sbjct 762 GAGCATGCTACTCCGTCATTTAGGCAAATTATGGCTCACTTTAGTAACGCGGCAGAAGCA 703 Query 9224 TATATTGAAATGAGGTGTTCGATGGGGTCATATATGCCTAGATATGGCCTCCTGCGCAAT 9283 || |||| | ||| | | | | | || ||||| | ||||| || | | ||| Sbjct 702 TACATTGCGAAGAGAAATGCTACTGAGAGGTACATGCCGCGGTATGGAATCAAGAGAAAT 643 Query 9284 TTGAGAGACAAGAGTTTGGCACGTTATGCTTTCGACTTCTATGAAGTCACTGCAAAAACG 9343 |||| |||| || | || | || ||||||||||||||||| || | | | ||||| Sbjct 642 TTGACTGACATTAGCCTCGCTAGATACGCTTTCGACTTCTATGAGGTGAATTCGAAAACA 583 Query 9344 TCCACACGAGCACGAGAAGCAGTCGCGCAGATGAAAGCTGCAGCTCTCAGCAACGTTAAC 9403 | | || || ||||| | ||||||||| |||||||| || | ||| | Sbjct 582 CCTGATAGGGCTCGCGAAGCTCACATGCAGATGAAGGCTGCAGCGCTGCGAAACACCAGT 523 Query 9404 AACAAGCTGTTTGGCTTGGATGGGAATGTTGCGACCACTAGCGAGAACACTGAAAGGCAC 9463 ||| ||||||| |||| || | |||| | || || ||||| || || ||| Sbjct 522 CGCAAAATGTTTGGTATGGACGGCAGTGTTAGTAACAAGGAAGAAAACACGGAGAGACAC 463 Query 9464 AC--TGCAAGGGATGTGAATCAGA-ACATGCAC 9493 || || || ||||| ||| ||| |||||||| Sbjct 462 ACAGTGGAA--GATGTCAAT-AGAGACATGCAC 433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31372929023776