Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= NC_032912.1 Length=9356 Score E Sequences producing significant alignments: (Bits) Value seq4616 165 5e-37 >seq4616 Length=1066 Score = 165 bits (182), Expect = 5e-37 Identities = 312/457 (68%), Gaps = 4/457 (1%) Strand=Plus/Minus Query 8603 TACAACCCACCACAGGATGATATTTCAAATACCATAGCAACACAGGCACAATTTGAAGCG 8662 ||||| || | ||| ||| ||||| || || || || || |||||||||| | Sbjct 993 TACAATCCGCAACAAATTGACATTTCTAACACTCGTGCCACTCATTCACAATTTGAGAAG 934 Query 8663 TGGTACAATGGTGTGAAAAACGCATATGAAGTCGAAGATTCACAAATGGGTATAATTTTG 8722 ||||| | || |||| || | |||| | | ||| ||||| | || | Sbjct 933 TGGTATGAGGGAGTGAGGAATGATTATGGCCTTAATGATAATGAAATGCAAGTGATGCTA 874 Query 8723 AACGGTCTTATGGTGTGGTGCATAGAAAATGGAACATCAGGAGACCTGCAGGGTGAGTGG 8782 || ||| | ||||| ||||| || || ||||| ||||| |||| | |||| ||| Sbjct 873 AATGGTTTGATGGTTTGGTGTATCGAGAATGGTACATCTCCAGACATATCTGGTGTCTGG 814 Query 8783 ACGATGATGGATGGTGAGGAACAGGTTGCATATCCTTTAAAACCAATTCTTGATAACGCA 8842 ||||||||||| || || |||| ||||| | || || | |||| | || Sbjct 813 GTTATGATGGATGGGGAAACCCAAGTTGATTATCCAATCAAGCCTTTGATTGAGCATGCT 754 Query 8843 AAGCCAACATTCCGCCAAATAATGGCACATTTTTCACAAGTTGCAGAAGCTTATATAGAG 8902 | || |||| | ||||| ||||| || ||| | | |||||||| || || | | Sbjct 753 ACTCCGTCATTTAGGCAAATTATGGCTCACTTTAGTAACGCGGCAGAAGCATACATTGCG 694 Query 8903 AAGAGGAATGCGACAGAGAGGTACATGCCACGGTATGGACTTCAGAGAAATTTGACTGA- 8961 ||||| ||||| || |||||||||||||| ||||||||| | |||||||||||||||| Sbjct 693 AAGAGAAATGCTACTGAGAGGTACATGCCGCGGTATGGAATCAAGAGAAATTTGACTGAC 634 Query 8962 -TTACGGTTTGGCTAGATACGCTTTTGATTTCTATCGACTGACTTCAGGAACTCCTGTGC 9020 ||| | | |||||||||||||| || |||||| ||| ||| ||| |||| Sbjct 633 ATTA--GCCTCGCTAGATACGCTTTCGACTTCTATGAGGTGAATTCGAAAACACCTGATA 576 Query 9021 GTGCTAGAGAGGCACATATGCAAATGAAGGCAGCAGC 9057 | ||| | || || || ||||| |||||||| ||||| Sbjct 575 GGGCTCGCGAAGCTCACATGCAGATGAAGGCTGCAGC 539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 29818039822720