Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27] 463,906 sequences; 661,937,708 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq157654 95.1 7e-16 seq326060 87.8 1e-13 >seq157654 Length=466 Score = 95.1 bits (104), Expect = 7e-16 Identities = 57/60 (95%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 407 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 466 >seq326060 Length=207 Score = 87.8 bits (96), Expect = 1e-13 Identities = 60/65 (92%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 || ||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||| Sbjct 141 GTCGACCTTTTATCTAATAAATGCATCCCTTCTAGAAGTCGTGGTTTGTTGCACGTATTA 82 Query 8909 GCTCT 8913 ||||| Sbjct 81 GCTCT 77 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28258148631768