Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq413 104 1e-18 seq5529 98.7 6e-17 seq1835 98.7 6e-17 seq563 96.9 2e-16 seq5851 95.1 7e-16 seq5624 95.1 7e-16 seq4653 95.1 7e-16 seq678 95.1 7e-16 seq644 95.1 7e-16 seq433 89.7 3e-14 seq2719 87.8 1e-13 seq7 87.8 1e-13 seq2378 86.0 4e-13 seq2159 86.0 4e-13 seq1286 86.0 4e-13 seq1578 84.2 1e-12 seq85 84.2 1e-12 seq9832 80.6 2e-11 >seq413 Length=404688 Score = 104 bits (114), Expect = 1e-18 Identities = 67/71 (94%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 256107 GCTCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 256048 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 256047 GTATTAGCTCT 256037 >seq5529 Length=76990 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 42015 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 41956 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 41955 GTATTAGCTCT 41945 >seq1835 Length=198957 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 59539 GCCCGTGTCGAACTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 59480 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 59479 GTATTAGCTCT 59469 Score = 98.7 bits (108), Expect = 6e-17 Identities = 66/71 (93%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 70224 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 70165 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 70164 GTATTAGCTCT 70154 Score = 78.8 bits (86), Expect = 5e-11 Identities = 51/55 (93%), Gaps = 1/55 (2%) Strand=Plus/Minus Query 8852 TTGACCTTTTATCTAATAAATGCATCCCTTCCAGAA-GTCGGGGTTTGTTGCACG 8905 |||||||||||| ||||||||||||||||||||||| |||||| |||||||| || Sbjct 86302 TTGACCTTTTATATAATAAATGCATCCCTTCCAGAAGGTCGGGCTTTGTTGCGCG 86248 >seq563 Length=606433 Score = 96.9 bits (106), Expect = 2e-16 Identities = 62/65 (95%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct 583833 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTGGTTGCACGTATTA 583774 Query 8909 GCTCT 8913 ||||| Sbjct 583773 GCTCT 583769 >seq5851 Length=80636 Score = 95.1 bits (104), Expect = 7e-16 Identities = 65/71 (92%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 6883 GCCCGCGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCAGGGTTTGTTGCAT 6942 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 6943 GTATTAGCTCT 6953 >seq5624 Length=67149 Score = 95.1 bits (104), Expect = 7e-16 Identities = 65/71 (92%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 332 GCCCGCGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCAGGGTTTGTTGCAT 273 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 272 GTATTAGCTCT 262 >seq4653 Length=149851 Score = 95.1 bits (104), Expect = 7e-16 Identities = 65/71 (92%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 57787 GCCCGCGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAACTCGGGGTTGGTTGCAC 57846 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 57847 GTATTAGCTCT 57857 >seq678 Length=338508 Score = 95.1 bits (104), Expect = 7e-16 Identities = 65/71 (92%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 67158 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCATAAGTCGGGGTTTGTTGCAC 67099 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 67098 GTATTAGCTCT 67088 >seq644 Length=342969 Score = 95.1 bits (104), Expect = 7e-16 Identities = 65/71 (92%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || ||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 263517 GCCCGTTTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTGGTTGCAC 263576 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 263577 GTATTAGCTCT 263587 >seq433 Length=419541 Score = 89.7 bits (98), Expect = 3e-14 Identities = 58/61 (95%), Gaps = 2/61 (3%) Strand=Plus/Plus Query 8855 ACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTC 8912 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct 49457 ACCTTTTATCTAATAAATGCATCCCTTCCAGAAATCGGGGTTTGTTGCACGTATTAGCTC 49516 Query 8913 T 8913 | Sbjct 49517 T 49517 >seq2719 Length=223608 Score = 87.8 bits (96), Expect = 1e-13 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct 112615 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAAAAGTCGGGGTTGGTTGCAC 112674 Query 8905 G 8905 | Sbjct 112675 G 112675 >seq7 Length=1035979 Score = 87.8 bits (96), Expect = 1e-13 Identities = 60/65 (92%), Gaps = 2/65 (3%) Strand=Plus/Plus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 || ||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| Sbjct 200251 GTCGACCTTTTATCTAATAAATGCATCCGTTCCAGAAGTCGGGGTTAGTTGCACGTATTA 200310 Query 8909 GCTCT 8913 ||||| Sbjct 200311 GCTCT 200315 >seq2378 Length=208801 Score = 86.0 bits (94), Expect = 4e-13 Identities = 50/52 (96%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905 ||| ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 122154 GACGTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTGGTTGCACG 122205 >seq2159 Length=214185 Score = 86.0 bits (94), Expect = 4e-13 Identities = 63/71 (89%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || |||||||||||| ||||||||||||||||| ||| ||||||| ||||||||||||| Sbjct 45199 GCCCGTGTTGACCTTCTATCTAATAAATGCATCTGTTCTAGAAGTCAGGGTTTGTTGCAC 45258 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 45259 GTATTAGCTCT 45269 Score = 80.6 bits (88), Expect = 2e-11 Identities = 56/61 (92%), Gaps = 2/61 (3%) Strand=Plus/Plus Query 8855 ACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCA-CGATT-GCTC 8912 ||||| |||||||||||||||||||||||||||||||||||| |||||| | ||| |||| Sbjct 36440 ACCTTCTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTGGTTGCATCTATTAGCTC 36499 Query 8913 T 8913 | Sbjct 36500 T 36500 >seq1286 Length=254314 Score = 86.0 bits (94), Expect = 4e-13 Identities = 50/52 (96%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 8854 GACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905 ||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct 156554 GACCTTTTATCTAATAAATGCATCCCTTCTAGAAGTCGGGGTTGGTTGCACG 156605 >seq1578 Length=616854 Score = 84.2 bits (92), Expect = 1e-12 Identities = 59/65 (91%), Gaps = 2/65 (3%) Strand=Plus/Plus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 || |||||||||||||||||||| |||||||||||||||||||||| |||||| | ||| Sbjct 354700 GTCGACCTTTTATCTAATAAATGTATCCCTTCCAGAAGTCGGGGTTGGTTGCATGTATTA 354759 Query 8909 GCTCT 8913 ||||| Sbjct 354760 GCTCT 354764 >seq85 Length=680075 Score = 84.2 bits (92), Expect = 1e-12 Identities = 59/65 (91%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 || ||||||||||||||||||||||||||||| ||||||||||||| |||||| | ||| Sbjct 1081 GTCGACCTTTTATCTAATAAATGCATCCCTTCTAGAAGTCGGGGTTGGTTGCATGTATTA 1022 Query 8909 GCTCT 8913 ||||| Sbjct 1021 GCTCT 1017 >seq9832 Length=13844 Score = 80.6 bits (88), Expect = 2e-11 Identities = 59/66 (89%), Gaps = 2/66 (3%) Strand=Plus/Plus Query 8850 TGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT 8908 ||| |||||||||||||||||||||||||||| ||||||||||||| ||| |||| ||| Sbjct 8428 TGTCGACCTTTTATCTAATAAATGCATCCCTTATAGAAGTCGGGGTTGGTTTCACGTATT 8487 Query 8909 -GCTCT 8913 ||||| Sbjct 8488 AGCTCT 8493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28401188739396