Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20pallidicaule_20[genbank_20GCA_5F001687005.1_202016-07- 18] 3,013 sequences; 337,010,935 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq59 104 1e-18 seq2348 93.3 2e-15 >seq59 Length=614426 Score = 104 bits (114), Expect = 1e-18 Identities = 67/71 (94%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 437054 GCTCGCGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTACAC 436995 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 436994 GTATTAGCTCT 436984 >seq2348 Length=2239424 Score = 93.3 bits (102), Expect = 2e-15 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || ||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 913153 GCCCGCGTTAACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCGC 913212 Query 8905 G 8905 | Sbjct 913213 G 913213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28405437129564