Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq7127 143 1e-30 seq2592 127 8e-26 seq498 125 3e-25 >seq7127 Length=125319 Score = 143 bits (158), Expect = 1e-30 Identities = 100/114 (88%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 6 TGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCGCTTC 65 ||||||||||||| |||| | ||||| | | |||||||||||||||||||||||||| Sbjct 69587 TGATACTATGCAATTTGTAGAAGCAGAAGTACAGACAGTATGCGTAGGATTAGCCGCTTC 69528 Query 66 AATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||||| |||| |||| |||||||||||||||||||||||||||||||| Sbjct 69527 AATGGGATCGCTTATTTTGGTAGGAGGAGAAATTACCAAACGTCTAGCATTCCC 69474 >seq2592 Length=49570 Score = 127 bits (140), Expect = 8e-26 Identities = 99/118 (84%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||| ||||| ||| ||| |||| | ||||| | | |||||||||||||||||||||| Sbjct 34696 TTTTTGATAATATTCAATTTGTAGAAGCAGAAGTACAGACAGTATGCGTAGGATTAGCCG 34637 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||| |||| || | |||| |||||||||||||||||||||||||||||||| Sbjct 34636 CTTCAATGAGATCGCTTCTTTTGGTAGGAGGAGAAATTACCAAACGTCTAGCATTCCC 34579 >seq498 Length=436133 Score = 125 bits (138), Expect = 3e-25 Identities = 96/114 (84%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 6 TGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCGCTTC 65 ||||||||||||| |||| | ||||| | | ||||||| ||||||||||||||||| Sbjct 315648 TGATACTATGCAATTTGTAGAAGCAGAAGTACAGACAGTATCTGTAGGATTAGCCGCTTC 315589 Query 66 AATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||||| || | |||| ||| |||||||||||||||||||||||||||| Sbjct 315588 AATGGGATCGCTTCTTTTGGTAGGAAGAGAAATTACCAAACGTCTAGCATTCCC 315535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19044915303360