Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq3731 96.9 2e-16 seq2290 96.9 2e-16 seq406 96.9 2e-16 seq176 96.9 2e-16 seq99 96.9 2e-16 seq5 96.9 2e-16 seq135 95.1 7e-16 seq402 93.3 2e-15 seq3 93.3 2e-15 seq998 89.7 3e-14 seq405 89.7 3e-14 seq1 87.8 1e-13 seq136 86.0 4e-13 >seq3731 Length=6131 Score = 96.9 bits (106), Expect = 2e-16 Identities = 62/65 (95%), Gaps = 2/65 (3%) Strand=Plus/Plus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 3515 GTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTA 3574 Query 8909 GCTCT 8913 ||||| Sbjct 3575 GCTCT 3579 >seq2290 Length=46907 Score = 96.9 bits (106), Expect = 2e-16 Identities = 62/65 (95%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 7212 GTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTA 7153 Query 8909 GCTCT 8913 ||||| Sbjct 7152 GCTCT 7148 >seq406 Length=85105 Score = 96.9 bits (106), Expect = 2e-16 Identities = 62/65 (95%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 23543 GTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTA 23484 Query 8909 GCTCT 8913 ||||| Sbjct 23483 GCTCT 23479 Score = 96.9 bits (106), Expect = 2e-16 Identities = 62/65 (95%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 84535 GTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTA 84476 Query 8909 GCTCT 8913 ||||| Sbjct 84475 GCTCT 84471 >seq176 Length=357364 Score = 96.9 bits (106), Expect = 2e-16 Identities = 62/65 (95%), Gaps = 2/65 (3%) Strand=Plus/Plus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 5416 GTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTA 5475 Query 8909 GCTCT 8913 ||||| Sbjct 5476 GCTCT 5480 Score = 96.9 bits (106), Expect = 2e-16 Identities = 62/65 (95%), Gaps = 2/65 (3%) Strand=Plus/Plus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 17307 GTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTA 17366 Query 8909 GCTCT 8913 ||||| Sbjct 17367 GCTCT 17371 >seq99 Length=133878 Score = 96.9 bits (106), Expect = 2e-16 Identities = 62/65 (95%), Gaps = 2/65 (3%) Strand=Plus/Plus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 119903 GTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTA 119962 Query 8909 GCTCT 8913 ||||| Sbjct 119963 GCTCT 119967 >seq5 Length=48169137 Score = 96.9 bits (106), Expect = 2e-16 Identities = 62/65 (95%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 18682562 GTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTA 18682503 Query 8909 GCTCT 8913 ||||| Sbjct 18682502 GCTCT 18682498 Score = 96.9 bits (106), Expect = 2e-16 Identities = 62/65 (95%), Gaps = 2/65 (3%) Strand=Plus/Plus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 23565019 GTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTA 23565078 Query 8909 GCTCT 8913 ||||| Sbjct 23565079 GCTCT 23565083 >seq135 Length=303018 Score = 95.1 bits (104), Expect = 7e-16 Identities = 65/71 (92%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 ||| | || |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 141318 GCTTGCGTCGACCTTTTATCTAATAAATGCATCCCATCCAGAAGTCGGGGTTTGTTGCAC 141259 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 141258 GTATTAGCTCT 141248 Score = 95.1 bits (104), Expect = 7e-16 Identities = 61/64 (95%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 8852 TTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-G 8909 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct 159983 TTGACCTTTTATCTAATAAATGCATCCCTTCCATAAGTCGGGGTTTGTTGCACGTATTAG 159924 Query 8910 CTCT 8913 |||| Sbjct 159923 CTCT 159920 >seq402 Length=413342 Score = 93.3 bits (102), Expect = 2e-15 Identities = 61/65 (94%), Gaps = 2/65 (3%) Strand=Plus/Plus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 || || ||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 104514 GTCGATCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTA 104573 Query 8909 GCTCT 8913 ||||| Sbjct 104574 GCTCT 104578 >seq3 Length=39989001 Score = 93.3 bits (102), Expect = 2e-15 Identities = 53/54 (98%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9584317 GTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 9584370 >seq998 Length=263122 Score = 89.7 bits (98), Expect = 3e-14 Identities = 58/61 (95%), Gaps = 2/61 (3%) Strand=Plus/Minus Query 8855 ACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTC 8912 |||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||| Sbjct 149012 ACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCAGGGTTTGTTGCACGTATTAGCTC 148953 Query 8913 T 8913 | Sbjct 148952 T 148952 >seq405 Length=84745 Score = 89.7 bits (98), Expect = 3e-14 Identities = 56/58 (97%), Gaps = 2/58 (3%) Strand=Plus/Plus Query 8858 TTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 7581 TTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 7638 Score = 84.2 bits (92), Expect = 1e-12 Identities = 55/58 (95%), Gaps = 2/58 (3%) Strand=Plus/Plus Query 8858 TTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT-GCTCT 8913 |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||| Sbjct 21460 TTTTATCTAATAAATGCATCTCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCT 21517 Score = 80.6 bits (88), Expect = 2e-11 Identities = 59/66 (89%), Gaps = 2/66 (3%) Strand=Plus/Plus Query 8850 TGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT 8908 ||| || ||||||||||||||||||||| |||||| |||||||||||||||||| | ||| Sbjct 73992 TGTCGATCTTTTATCTAATAAATGCATCTCTTCCAAAAGTCGGGGTTTGTTGCATGTATT 74051 Query 8909 -GCTCT 8913 ||||| Sbjct 74052 AGCTCT 74057 >seq1 Length=48359943 Score = 87.8 bits (96), Expect = 1e-13 Identities = 61/67 (91%), Gaps = 2/67 (3%) Strand=Plus/Minus Query 8849 GTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-AT 8907 |||| |||||||||||||||||||||||||||| |||||||||||||||||||| | || Sbjct 45816775 GTGTCAACCTTTTATCTAATAAATGCATCCCTTCTAGAAGTCGGGGTTTGTTGCATGTAT 45816716 Query 8908 T-GCTCT 8913 | ||||| Sbjct 45816715 TAGCTCT 45816709 >seq136 Length=390039 Score = 86.0 bits (94), Expect = 4e-13 Identities = 52/54 (96%), Gaps = 1/54 (2%) Strand=Plus/Plus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 135472 GTCGACCTTTTATCTAATAAATGCATCC-TTCCAGAAGTCGGGGTTTGTTGCAC 135524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28404122410356