Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq33654 95.1 7e-16 seq33283 95.1 7e-16 seq24041 95.1 7e-16 seq9766 93.3 2e-15 seq21714 84.2 1e-12 >seq33654 Length=52327 Score = 95.1 bits (104), Expect = 7e-16 Identities = 65/71 (92%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 49768 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTTGGGGTTTGTTGCAC 49709 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 49708 GTATTAGCTCT 49698 >seq33283 Length=3281 Score = 95.1 bits (104), Expect = 7e-16 Identities = 65/71 (92%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 105 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTTGGGGTTTGTTGCAC 164 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 165 GTATTAGCTCT 175 >seq24041 Length=6280 Score = 95.1 bits (104), Expect = 7e-16 Identities = 65/71 (92%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 212 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTTGGGGTTTGTTGCAC 153 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 152 GTATTAGCTCT 142 >seq9766 Length=43015 Score = 93.3 bits (102), Expect = 2e-15 Identities = 61/65 (94%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908 || |||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct 36997 GTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCATGTATTA 36938 Query 8909 GCTCT 8913 ||||| Sbjct 36937 GCTCT 36933 >seq21714 Length=1715 Score = 84.2 bits (92), Expect = 1e-12 Identities = 61/68 (90%), Gaps = 2/68 (3%) Strand=Plus/Plus Query 8848 CGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-A 8906 || || |||||||||||||||||||||||||||||||||||| ||||||||| |||| | Sbjct 1492 CGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTAAGGGTTTGTTACACGTA 1551 Query 8907 TT-GCTCT 8913 || ||||| Sbjct 1552 TTAGCTCT 1559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28393537866144