Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq124 95.1 7e-16 seq58 95.1 7e-16 seq20 95.1 7e-16 seq7 95.1 7e-16 seq18 87.8 1e-13 >seq124 Length=178874 Score = 95.1 bits (104), Expect = 7e-16 Identities = 65/71 (92%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 144986 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGGTGCAC 145045 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 145046 GTATTAGCTCT 145056 >seq58 Length=473374 Score = 95.1 bits (104), Expect = 7e-16 Identities = 65/71 (92%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 270689 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGGTGCAC 270748 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 270749 GTATTAGCTCT 270759 >seq20 Length=1106287 Score = 95.1 bits (104), Expect = 7e-16 Identities = 65/71 (92%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 188569 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGGTGCAC 188510 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 188509 GTATTAGCTCT 188499 >seq7 Length=32205869 Score = 95.1 bits (104), Expect = 7e-16 Identities = 65/71 (92%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 25305765 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGGTGCAC 25305824 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 25305825 GTATTAGCTCT 25305835 Score = 80.6 bits (88), Expect = 2e-11 Identities = 62/71 (87%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 25341809 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCAGGGTTTGGCGCAT 25341868 Query 8905 G-ATT-GCTCT 8913 | ||| ||||| Sbjct 25341869 GTATTAGCTCT 25341879 >seq18 Length=1204759 Score = 87.8 bits (96), Expect = 1e-13 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904 || || || ||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct 766564 GCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTACCAGAAGTCGGGGTTTGGTGCAC 766623 Query 8905 G 8905 | Sbjct 766624 G 766624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28404851993232