Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq427 123 9e-25 seq332 123 9e-25 >seq427 Length=1970407 Score = 123 bits (136), Expect = 9e-25 Identities = 98/118 (83%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||| | ||| || | | ||| ||||| | ||||| |||| Sbjct 665304 TTTATGATACTATGCAATTTGTACGACCCGATGTACAGACAATATGCATGGGATTGGCCG 665363 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||| | ||| ||||||| |||||||||| ||||||||||||| |||||||||| Sbjct 665364 CTTCAATAGCATCATTTATCCTAGTCGGAGGAGCAATTACCAAACGTATAGCATTCCC 665421 Score = 123 bits (136), Expect = 9e-25 Identities = 98/118 (83%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||| | ||| || | | ||| ||||| | ||||| |||| Sbjct 666450 TTTATGATACTATGCAATTTGTACGACCCGATGTACAGACAATATGCATGGGATTGGCCG 666509 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||| | ||| ||||||| |||||||||| ||||||||||||| |||||||||| Sbjct 666510 CTTCAATAGCATCCTTTATCCTAGTCGGAGGAGCAATTACCAAACGTATAGCATTCCC 666567 Score = 82.4 bits (90), Expect = 3e-12 Identities = 91/117 (78%), Gaps = 7/117 (6%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||| | || || | | ||| ||||| | ||||| | || Sbjct 664589 TTTATGATACTATGCAATTTGTACGAC--GATGTACAGACAATATGCATGGGATT-GGCG 664645 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCC 118 ||||||| | ||| ||||||| |||||| ||| |||||| |||| ||||||||| Sbjct 664646 CTTCAATAGCATCATTTATCCTAGTCGGA-GAGCAATTAC---ACGTATAGCATTCC 664698 >seq332 Length=55566 Score = 123 bits (136), Expect = 9e-25 Identities = 98/118 (83%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||| | ||| || | | ||| ||||| | ||||| |||| Sbjct 48321 TTTATGATACTATGCAATTTGTACGACCCGATGTACAGACAATATGCATGGGATTGGCCG 48262 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||| | ||| ||||||| |||||||||| ||||||||||||| |||||||||| Sbjct 48261 CTTCAATAGCATCATTTATCCTAGTCGGAGGAGCAATTACCAAACGTATAGCATTCCC 48204 Score = 118 bits (130), Expect = 4e-23 Identities = 97/118 (82%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||| | ||| || | ||| ||||| | ||||| |||| Sbjct 47543 TTTATGATACTATGCAATTTGTACGACCCGATGTAACAACAATATGCATGGGATTGGCCG 47484 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||| | ||| ||||||| |||||||||| ||||||||||||| |||||||||| Sbjct 47483 CTTCAATAGCATCATTTATCCTAGTCGGAGGAGCAATTACCAAACGTATAGCATTCCC 47426 Score = 116 bits (128), Expect = 1e-22 Identities = 99/120 (83%), Gaps = 3/120 (3%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 ||||||||||||||||| |||| | ||| || | | ||| ||||| | ||||| |||| Sbjct 46801 TTTATGATACTATGCAATTTGTACGACCCGATGTACAGACAATATGCAT-GGATTGGCCG 46743 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTC--TAGCATTCCC 119 ||||||| | ||| ||||||| |||||||||| |||||||||||||| |||||||||| Sbjct 46742 CTTCAATAGCATCCTTTATCCTAGTCGGAGGAGCAATTACCAAACGTCTATAGCATTCCC 46683 Score = 116 bits (128), Expect = 1e-22 Identities = 98/119 (82%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATT-GTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCC 60 ||||||||||||||||| || || | ||| || | | ||| ||||| | ||||| ||| Sbjct 49073 TTTATGATACTATGCAATTTTGTACGACCCGATGTACAGACAATATGCATGGGATTGGCC 49014 Query 61 GCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||| | ||| ||||||| |||||||||| ||||||||||||| |||||||||| Sbjct 49013 GCTTCAATAGCATCATTTATCCTAGTCGGAGGAGCAATTACCAAACGTATAGCATTCCC 48955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19046253134400