Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20sativus_20[refseq_20GCF_5F000004075.2_202014-10-27] 190 sequences; 195,669,205 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq190 152 2e-33 seq1 152 2e-33 >seq190 Length=155293 Score = 152 bits (168), Expect = 2e-33 Identities = 105/119 (88%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 1 CTTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCC 60 |||| ||||||||||||| ||||| |||||| ||| |||| |||| | ||||||||| Sbjct 73130 CTTTTTGATACTATGCAATTTGTGTCACCAGATGTCCATACAATATGTATGGGATTAGCC 73071 Query 61 GCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||| Sbjct 73070 GCTTCAATGGGATCTTTTATTCTAGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 73012 >seq1 Length=29149675 Score = 152 bits (168), Expect = 2e-33 Identities = 105/119 (88%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 1 CTTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCC 60 |||| ||||||||||||| ||||| |||||| ||| |||| |||| | ||||||||| Sbjct 17718347 CTTTTTGATACTATGCAATTTGTGTCACCAGATGTCCATACAATATGTATTGGATTAGCC 17718288 Query 61 GCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 ||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||| Sbjct 17718287 GCTTCAATGGGATCTTTTATTCTAGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 17718229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19046360419200