Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_001747.1 Length=5987 Score E Sequences producing significant alignments: (Bits) Value seq4825 145 3e-31 seq4 113 2e-21 >seq4825 Length=155848 Score = 145 bits (160), Expect = 3e-31 Identities = 103/118 (87%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 |||||||||| |||||| |||||| |||||| | | ||| ||||| | |||||||||| Sbjct 71002 TTTATGATACAATGCAATTTGTGCGACCAGATGTACAGACAATATGCATGGGATTAGCCG 70943 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119 |||||||||||||| ||||| | | ||||||||||||||||||||||||||||||||| Sbjct 70942 CTTCAATGGGATCTTTTATCTTAGCCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 70885 >seq4 Length=35924511 Score = 113 bits (124), Expect = 2e-21 Identities = 91/110 (83%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61 |||||||||| |||||| |||||| |||||| | | ||| ||||| | ||||||| | Sbjct 7553294 TTTATGATACAATGCAATTTGTGCGACCAGATGTACAGACAATATGCATGAGATTAGCTG 7553353 Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTA 111 |||||||||||||| ||||| | | | |||||||||||||||||||| || Sbjct 7553354 CTTCAATGGGATCTTTTATCTTAGCCAGAGGAGAAATTACCAAACGTTTA 7553403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19045394647680