Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_001747.1
Length=5987
Score E
Sequences producing significant alignments: (Bits) Value
seq8273 104 9e-19
seq180 93.3 2e-15
seq48488 91.5 6e-15
>seq8273
Length=27398
Score = 104 bits (114), Expect = 9e-19
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 36 CCGTACAGTATGCGTAGGATTAGCCGCTTCAATGGGATCTGTTATCCTGGTCGGAGGAGA 95
|| |||| ||||| | ||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 12812 CCATACAATATGCATGGGAATAGCCGCTTCAATGGGATCTTTTATCCTGGTCGGAGGAGA 12871
Query 96 AATTACCAAACG 107
||||||||||||
Sbjct 12872 AATTACCAAACG 12883
>seq180
Length=138302
Score = 93.3 bits (102), Expect = 2e-15
Identities = 80/99 (81%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 2 TTTATGATACTATGCAAATTGTGCTACCAGAAATCCGTACAGTATGCGTAGGATTAGCCG 61
||| |||| |||||||| ||||| ||||| | | ||||||||||| | ||| || |||
Sbjct 127148 TTTTTGATGCTATGCAACTTGTGTTACCATATACATGTACAGTATGCATTGGAATAACCG 127089
Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTA 100
|||||||| |||| | ||| |||| |||||||||||||
Sbjct 127088 TTTCAATGGAATCTTTAATCATGGTTGGAGGAGAAATTA 127050
>seq48488
Length=2920
Score = 91.5 bits (100), Expect = 6e-15
Identities = 55/58 (95%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 62 CTTCAATGGGATCTGTTATCCTGGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCC 119
|||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||
Sbjct 2778 CTTCAATGGGATCTTTTATCCTGGTCGGAGGAGAAATTACCAAACGTTTTGCATTCCC 2835
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 18965656417920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |