Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fagopyrum_20esculentum_20[genbank_20GCA_5F001661195.1_202016-06-07]
387,594 sequences; 1,177,687,305 total letters
Query= NC_033774.1
Length=8913
Score E
Sequences producing significant alignments: (Bits) Value
seq2198 89.7 3e-14
seq15876 86.0 4e-13
seq3167 86.0 4e-13
seq41506 84.2 1e-12
seq7918 84.2 1e-12
seq202399 80.6 2e-11
seq8243 78.8 5e-11
>seq2198
Length=88711
Score = 89.7 bits (98), Expect = 3e-14
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 8848 CGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 36016 CGCGTCGACCTTTTATCTAATAAATGCGTCCCTTCCAGAAGTCGGGGTTTGTTGCAC 35960
>seq15876
Length=25779
Score = 86.0 bits (94), Expect = 4e-13
Identities = 63/71 (89%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| ||||| ||||||||||||||||||||| ||||| || ||||| ||||||||||||||
Sbjct 24587 GCCCGTGTCGACCTTTTATCTAATAAATGCGTCCCTCCCGGAAGTGGGGGTTTGTTGCAC 24646
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 24647 GTATTAGCTCT 24657
>seq3167
Length=41999
Score = 86.0 bits (94), Expect = 4e-13
Identities = 63/71 (89%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || |||||||||||||||||||||||| |||||||| ||| ||||||||| ||||||
Sbjct 30395 GCCCGCGTTGACCTTTTATCTAATAAATGCGTCCCTTCCGGAATTCGGGGTTTTTTGCAC 30454
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 30455 GTATTAGCTCT 30465
>seq41506
Length=3812
Score = 84.2 bits (92), Expect = 1e-12
Identities = 61/68 (90%), Gaps = 2/68 (3%)
Strand=Plus/Plus
Query 8848 CGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-A 8906
|| || ||||||||||||||||||||| |||||||| ||||||| ||||||||||||| |
Sbjct 338 CGAGTCGACCTTTTATCTAATAAATGCGTCCCTTCCGGAAGTCGCGGTTTGTTGCACGTA 397
Query 8907 TT-GCTCT 8913
|| |||||
Sbjct 398 TTAGCTCT 405
>seq7918
Length=24972
Score = 84.2 bits (92), Expect = 1e-12
Identities = 59/65 (91%), Gaps = 2/65 (3%)
Strand=Plus/Minus
Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908
|| ||||||||||||||||||||| |||||||| ||||||| ||||||||||||| |||
Sbjct 1905 GTCGACCTTTTATCTAATAAATGCGTCCCTTCCGGAAGTCGAGGTTTGTTGCACGTATTA 1846
Query 8909 GCTCT 8913
|||||
Sbjct 1845 GCTCT 1841
>seq202399
Length=17322
Score = 80.6 bits (88), Expect = 2e-11
Identities = 62/71 (87%), Gaps = 2/71 (3%)
Strand=Plus/Minus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| || || ||||||||||||||||||||| || |||| ||||||||||||||||||||
Sbjct 16923 GCCCGCGTCGACCTTTTATCTAATAAATGCGTCTCTTCTGGAAGTCGGGGTTTGTTGCAC 16864
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 16863 GTATTAGCTCT 16853
>seq8243
Length=55974
Score = 78.8 bits (86), Expect = 5e-11
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand=Plus/Minus
Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG-ATT- 8908
|| ||||||||||||||||||||| | |||||| |||||| |||||||||||||| |||
Sbjct 54863 GTCGACCTTTTATCTAATAAATGCGTTCCTTCCGGAAGTCAGGGTTTGTTGCACGTATTA 54804
Query 8909 GCTCT 8913
|||||
Sbjct 54803 GCTCT 54799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 28282535810232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |