Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20nubicola_20[genbank_20GCA_5F000511995.1_202013-12-06] 210,780 sequences; 203,686,407 total letters Query= NC_033774.1 Length=8913 Score E Sequences producing significant alignments: (Bits) Value seq199142 91.5 8e-15 seq207149 86.0 4e-13 >seq199142 Length=686 Score = 91.5 bits (100), Expect = 8e-15 Identities = 53/55 (96%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 34 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGAATTTGTTGCACG 88 >seq207149 Length=1628 Score = 86.0 bits (94), Expect = 4e-13 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905 |||||| ||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 347 GTTGACTTTTTATCTAATAAATGCATCCCTTCCAAAAGTCGGGATTTGTTGCACG 293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28339040613840