Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fragaria_20x_20ananassa_20[genbank_20GCA_5F000511835.1_202013-12-06]
625,966 sequences; 697,762,269 total letters
Query= NC_033774.1
Length=8913
Score E
Sequences producing significant alignments: (Bits) Value
seq602486 95.1 7e-16
seq532851 93.3 2e-15
seq608558 89.7 3e-14
seq472883 89.7 3e-14
seq16024 86.0 4e-13
>seq602486
Length=2287
Score = 95.1 bits (104), Expect = 7e-16
Identities = 65/71 (92%), Gaps = 2/71 (3%)
Strand=Plus/Plus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| |||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 281 GCCCGTGTTAACCTTTTATCTAATAAATGCATCCCTTCCAAAAGTCGGGATTTGTTGCAC 340
Query 8905 G-ATT-GCTCT 8913
| ||| |||||
Sbjct 341 GTATTAGCTCT 351
>seq532851
Length=347
Score = 93.3 bits (102), Expect = 2e-15
Identities = 57/61 (93%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 8845 GCTCGTGTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCAC 8904
|| |||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 67 GCCCGTGTTAACCTTTTATCTAATAAATGCATCCCTTCCAAAAGTCGGGATTTGTTGCAC 8
Query 8905 G 8905
|
Sbjct 7 G 7
>seq608558
Length=4881
Score = 89.7 bits (98), Expect = 3e-14
Identities = 52/54 (96%), Gaps = 0/54 (0%)
Strand=Plus/Minus
Query 8852 TTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905
|||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 1086 TTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGAGATTTGTTGCACG 1033
>seq472883
Length=465
Score = 89.7 bits (98), Expect = 3e-14
Identities = 52/54 (96%), Gaps = 0/54 (0%)
Strand=Plus/Plus
Query 8852 TTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905
|||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 36 TTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGAGATTTGTTGCACG 89
>seq16024
Length=4123
Score = 86.0 bits (94), Expect = 4e-13
Identities = 52/55 (95%), Gaps = 0/55 (0%)
Strand=Plus/Minus
Query 8851 GTTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACG 8905
|||||||||||||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct 3418 GTTGACCTTTTATCTAATAAATGCATCCATTCCAAAAGTCGGGATTTGTTGCACG 3364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 28206358793448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |